| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 2313413 | 43 (0.730) | 7 (0.140) | 3/88 | NT | 14.9% | intergenic (‑23/‑402) | yiiU/glpF | conserved hypothetical protein/glycerol facilitator |
| ? | minE | = 2313447 | 43 (0.840) | intergenic (‑57/‑368) | yiiU/glpF | conserved hypothetical protein/glycerol facilitator | |||||
CCTGCTGTACTTTTGCTTCCAGTTTCTCAAACACTTCTAATGACATTGTCATACCTCTCCTGAATTGCAAGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2313339‑2313413‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaggcgtCACCGGTAATCGGGACGAGGATTTTTATCCATCAACGCCTTGCAATTCAGGAGAGGTATGACAATGT < minE/2313447‑2313381 CCTGCTGTACTTTTGCTTCCAGTTTCTCAAACACTTCTAATGTCATTGTCATACCTCTCCTGAATTGCAAG > 1:1303606/1‑71 GCTGTACTTTTGCTTCCAGTTTCTCAAACACTTCTAATGACATTGTCATACCTCTCCTGAATTGCAAGGC < 1:1622352/70‑1 AACACTTCTAATGACATTGTCATACCTCTCCTGAATTGCAAG > 1:1169274/1‑42 TCTAATGACATTGTCATACCTCTCCTGAATTGCAAGGCGTCACCGGTAATCGGGACGAGGATTTTTATCCA > 1:3053696/1‑71 TCTAATGACATTGTCATACCTCTCCTGAATTGCAAGGCGTCACCGGTAATCGGGACGAGGATTTTTATCCA > 1:2858682/1‑71 TCTAATGACATTGTCATACCTCTCCTGAATTGCAAGGCGTCACCGGTAATCGGGACGAGGATTTTTATCCA > 1:2732937/1‑71 ATTGTCATACCTCTCCTGAATTGCAAGGCGTCACCGGTAATCGGGACGAGGATTTTTATCCATCAACGCCT < 1:1501671/71‑1 ATTGTCATACCTCTCCTGAATTGCAAGGCGTCACCGGTAATCGGGACGAGGATTTTTATCCATCAACGCCT < 1:1086351/71‑1 TCCTGAATTGCAAGGCGTCACCGGTAATCGGGACGAGGATTTTTATCCATCAAC > 1:2397589/1‑54 TCCTGAATTGCAAGGCGTCACCGGTAATCGGGACGAGGATTTTTATCCATCAAC > 1:2520607/1‑54 AAGGCGTCACCGGTAATCGGGACGAGGATTTTTATCCATCAACGCCTTGCAATTCAGGAGAGGTATGACA < 1:1439893/70‑1 AAGGCGTCACCGGTAATCGGGACGAGGATTTTTATCCATCAACGCCTTGCAATTCAGGAGAGGTATGAC < 1:2312555/69‑1 AAGGCGTCACCGGTAATCGGGACGAGGATTTTTATCCATCAACGCCTTGCAATTCAGGAGAGGTAT > 1:2173824/1‑66 AGGCGTCACCGGTAATCGGGACGAGGATTTTTATCCATCAACGCCTTGCAATTCAGGAGAGGTATGACAA < 1:2297027/70‑1 AGGCGTCACCGGTAATCGGGACGAGGATTTTTATCCATCAACGCCTTGCAATTCAGGAGAGGTATGACAA < 1:2377178/70‑1 AGGCGTCACCGGTAATCGGGACGAGGATTTTTATCCATCAACGCCTTGCAATTCAGGAGAGGTATGACA < 1:1967956/69‑1 GCGTCACCGGTAATCGGGACGAGGATTTTTATCCATCAACGCCTTGCAATTCAGGAGAGGTATGACAATGT < 1:1983591/71‑1 CCTGCTGTACTTTTGCTTCCAGTTTCTCAAACACTTCTAATGACATTGTCATACCTCTCCTGAATTGCAAGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2313339‑2313413‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaggcgtCACCGGTAATCGGGACGAGGATTTTTATCCATCAACGCCTTGCAATTCAGGAGAGGTATGACAATGT < minE/2313447‑2313381 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |