| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2602170 = | 56 (0.950) | 4 (0.080) | 3/90 | NT | 6.0% | coding (1821/2043 nt) | prlC | oligopeptidase A |
| ? | minE | 2602216 = | 77 (1.480) | coding (1867/2043 nt) | prlC | oligopeptidase A | |||||
CCCTCTTCCTCAAAGCGCGAGAAAGCATCTGCCGCCAGTACGTCAGCCCACAGGTAGCTGTAGTAACCTGCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2602244‑2602170‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcaGATGCTTTCTCGCGCTTTGAGGAAGAGGGCATTTTCAACCGTGAAACCGGGCAGTCGTTCCTCGAC > minE/2602216‑2602281 CCCTCTTCCTCAAAGCGCGAGAAAGCATCTGCCGCCAGTACGTCAGCCCACAGGTAGCTGTAGTAACCTGC < 1:2676550/71‑1CCCTCTTCCTCAAAGCGCGAGAAAGCATCTGCCGCCAGTACGTCAGCCCACAGGTAGCTGTAGTAACCTG < 1:2378339/70‑1 TCTTCCTCAAAGCGCGAGAAAGCATCTGCCGCCAGTACGTCAGCCCACAGGTAGCTGTAGTAACCTGCGG > 1:3372539/1‑70 GTACGTCAGCCCACAGGTAGCTGTAGTAACCTGCGGCAGATGCTTTCTCGCGCTTTGAGGAAGAGGGCATT < 1:206416/71‑1 GTACGTCAGCCCACAGGTAGCTGTAGTAACCTGCGGCAGATGCTTTCTCGCGCTTTGAGGAAGAGGGCATT < 1:210008/71‑1 TACGTCAGCCCACAGGTAGCTGTAGTAACCTGCGGCAGATGCTTTCTCGCGCTTTGAGGAAGAGGGCATTT < 1:1997592/71‑1 AGGTAGCTGTAGTAACCTGCGGCAGATGCTTTCTCGCGCTTTGAGGAAGAGGGCATTTTCAACCGTGAAAC < 1:2140700/71‑1 GCGGCAGATGCTTTCTCGCGCTTTGAGGAAGAGGGCATTTTCAACCGTGAAACCGGGCAGTCGTTCCTCGA < 1:285829/71‑1 GCGGCAGATGCTTTCTCGCGCTTTGAGGAAGAGGGCATTTTCAACCGTGAAACCGGGCAGTCGTTCCTCG < 1:603705/70‑1 GGCAGATGCTTTCTCGCGCTTTGAGGAAGAGGGCATTTTCAACCGTGAAACCGGGCAGTCGTTCCTCGAC > 1:2270822/1‑70 GGCAGATGCTTTCTCGCGCTTTGAGGAAGAGGGCATTTTCAACCGTGAAACCGGGCAGTCGTTCCTCGAC > 1:3119930/1‑70 GGCAGATGCTTTCTCGCGCTTTGAGGAAGAGGGCATTTTCAACCGTGAAACCGGGCAGTCGTTCCTCGAC > 1:3452626/1‑70 AGATGCTTTCTCGCGCTTTGAGGAAGAGGGCATTTTCAACCGTGAAACCGGGCAGTCGT < 1:1905384/59‑1 CCCTCTTCCTCAAAGCGCGAGAAAGCATCTGCCGCCAGTACGTCAGCCCACAGGTAGCTGTAGTAACCTGCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2602244‑2602170‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcaGATGCTTTCTCGCGCTTTGAGGAAGAGGGCATTTTCAACCGTGAAACCGGGCAGTCGTTCCTCGAC > minE/2602216‑2602281 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |