| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2794500 = | 63 (1.070) | 5 (0.090) | 3/92 | NT | 8.9% | coding (841/2424 nt) | plsB | glycerol‑3‑phosphate O‑acyltransferase |
| ? | minE | 2794521 = | 45 (0.850) | coding (820/2424 nt) | plsB | glycerol‑3‑phosphate O‑acyltransferase | |||||
CGGCGAATTTCTCTTACGAGATGATTCGCCTGACTGACCGTATTCTGGGCTTCACCTGGAACCGACTTTACCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2794574‑2794500‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggTGAAGCCCAGAATACGGTCAGTCAGGCGAATCATCTCGTAAGAGAAATTCGCCGCAATCTCTTCCATCAG > minE/2794521‑2794590 CGGCGAATTTCTCTTACGAGATGATTCGCCTGACTGACCGTATTCTGGGCTTCACCTGGAACCGACTTTAC < 1:2999399/71‑1 GGCGAATTTCTCTTACGAGATGATTCGCCTGACTGACCGTATTCTGGGCTTCACCTGGAACCGACTTTAC > 1:572115/1‑70 GCGAATTTCTCTTACGAGATGATTCGCCTGACTGACCGTATTCTGGGCTTCACCTGGAACCGACTTTACCA < 1:1811703/71‑1 GCGAATTTCTCTTACGAGATGATTCGCCTGACTGACCGTATTCTGGGCTTCACCTGGAACCGACTTTAC > 1:2863204/1‑69 GAATTTCTCTTACGAGATGATTCGCCTGACTGACCGTATTCTGGGCTTCACCTGGAACCGACTTTACCAGG > 1:2615687/1‑71 ACGAGATGATTCGCCTGACTGACCGTATTCTGGGCTTCACCTGGAACCGACTTTACCA < 1:1218178/58‑1 GATGATTCGCCTGACTGACCGTATTCTGGGCTTCACCTGGAACCGACTTTACC > 1:1782463/1‑53 CACCTGGAACCGACTTTACCAGGTGAAGCCCAGAATACGGTCAGTCAGGCGAATCATCTCGTAAGAGAAAT > 1:356745/1‑71 CACCTGGAACCGACTTTACCAGGTGAAGCCCAGAATACGGTCAGTCAGGCGAATCATCTCGTAAGAGAAA > 1:1582567/1‑70 CTGGAACCGACTTTACCAGGTGAAGCCCAGAATACGGTCAGTCAGGCGAATCATCTCGTAAGAGAAATTCG > 1:1596676/1‑71 CTGGAACCGACTTTACCAGGTGAAGCCCAGAATACGGTCAGTCAGGCGAATCATCTCGTAAGAGAAATTCG > 1:2621451/1‑71 GGAACCGACTTTACCAGGTGAAGCCCAGAATACGGTCAGTCAGGCGAATCATCTCGTAAGAGAA > 1:482668/1‑64 AGGTGAAGCCCAGAATACGGTCAGTCAGGCGAATCAT > 1:2519368/1‑37 AGGTGAAGCCCAGAATACGGTCAGTCAGGCGAATCAT > 1:755219/1‑37 AGGTGAAGCCCAGAATACGGTCAGTCAGGCGAATCAT > 1:599903/1‑37 AGGTGAAGCCCAGAATACGGTCAGTCAGGCGAATCAT > 1:2515149/1‑37 GTGAAGCCCAGAATACGGTCAGTCAGGCGAATCATCTCGTAAGAGAAATTCGCCGCAATCTCTTCCATCAG > 1:1041372/1‑71 GTGAAGCCCAGAATACGGTCAGTCAGGCGAATCATCTCGTAAGAGAAATTCGCCGCAATCTCTTCCATCAG > 1:1210210/1‑71 GTGAAGCCCAGAATACGGTCAGTCAGGCGAATCATCTCGTAAGAGAAATTCGCCGCAATCTCTTCCATCAG > 1:1127982/1‑71 CGGCGAATTTCTCTTACGAGATGATTCGCCTGACTGACCGTATTCTGGGCTTCACCTGGAACCGACTTTACCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2794574‑2794500‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggTGAAGCCCAGAATACGGTCAGTCAGGCGAATCATCTCGTAAGAGAAATTCGCCGCAATCTCTTCCATCAG > minE/2794521‑2794590 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |