| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1072805 | 89 (1.510) | 7 (0.130) | 3/92 | NT | 7.5% | coding (1014/1257 nt) | ydhQ | conserved hypothetical protein |
| ? | minE | = 1072846 | 92 (1.730) | coding (973/1257 nt) | ydhQ | conserved hypothetical protein | |||||
Only 100 of 138 total aligned reads displayed.
CCCTCTCCGCGCAGGCGTTTCACTTTCAGTTGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTGATGTTACCAACAATGAAAGTGACACTGTCACCTTTTACCGTACTGCCGTCTAG > minE/1072740‑1072876 | cccTCTCCGCGCAGGCGTTTCACTTTCAGTTGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTc > 1:2809911/1‑70 (MQ=255)cccTCTCCGCGCAGGCGTTTCACTTTCAGTTGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTc > 1:127852/1‑70 (MQ=255) ctcCGCGCAGGCGTTTCACTTTCAGTTGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTccacca > 1:2402083/1‑71 (MQ=255) tcCGCGCAGGCGTTTCACTTTCAGTTGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCAt > 1:1867760/1‑71 (MQ=255) cgcgCAGGCGTTTCACTTTCAGTTGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTccacca < 1:2489025/68‑1 (MQ=255) gcgcAGGCGTTTCACTTTCAGTTGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCa < 1:2569088/71‑1 (MQ=255) cgcAGGCGTTTCACTTTCAGTTGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCAg < 1:664118/71‑1 (MQ=255) gcAGGCGTTTCACTTTCAGTTGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCAtt > 1:1421278/1‑67 (MQ=255) ggCGTTTCACTTTCAGTTGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGAt < 1:1211446/69‑1 (MQ=255) ggCGTTTCACTTTCAGTTGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTg < 1:2027013/71‑1 (MQ=255) gCGTTTCACTTTCAGTTGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTGa > 1:2461731/1‑71 (MQ=255) gTTTCACTTTCAGTTGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTGATg < 1:1606588/71‑1 (MQ=255) tttCACTTTCAGTTGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTcc < 1:3149734/54‑1 (MQ=255) tttCACTTTCAGTTGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTcc < 1:192082/54‑1 (MQ=255) tCACTTTCAGTTGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTc > 1:2327486/1‑59 (MQ=255) tCACTTTCAGTTGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTGATGtt < 1:2121623/70‑1 (MQ=255) tCACTTTCAGTTGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTGATGtt < 1:166020/70‑1 (MQ=255) tCACTTTCAGTTGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTGATGTTa > 1:3279493/1‑71 (MQ=255) tCACTTTCAGTTGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTGATGTTa > 1:116648/1‑71 (MQ=255) tCACTTTCAGTTGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTGATGTTa > 1:3330648/1‑71 (MQ=255) cACTTTCAGTTGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTGATGTTa < 1:2719597/70‑1 (MQ=255) cACTTTCAGTTGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTGATGTTa < 1:1529333/70‑1 (MQ=255) cACTTTCAGTTGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTGATGTTAc > 1:3394880/1‑71 (MQ=255) cACTTTCAGTTGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTGATGTTAc > 1:2386106/1‑71 (MQ=255) cACTTTCAGTTGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTGATGTTAc > 1:941367/1‑71 (MQ=255) aCTTTCAGTTGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTGATGTTa > 1:3039950/1‑69 (MQ=255) cTTTCAGTTGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTGATGTTAcc > 1:1863294/1‑70 (MQ=255) ttCAGTTGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTGATGTTACcaa > 1:3398940/1‑70 (MQ=255) tCAGTTGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTGATGTTACcaac > 1:1063553/1‑70 (MQ=255) tCAGTTGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTGATGTTACcaac > 1:1483473/1‑70 (MQ=255) cAGTTGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTGATGTTACcaacaa > 1:2955839/1‑71 (MQ=255) ttGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTccacca > 1:3724762/1‑46 (MQ=255) ttGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCa < 1:2888971/50‑1 (MQ=255) ttGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCa < 1:1138712/50‑1 (MQ=255) ttGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGAtt < 1:2464292/54‑1 (MQ=255) ttGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGAtt < 1:368942/54‑1 (MQ=255) ttGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTGATGTTACCAACAATGa < 1:2147715/71‑1 (MQ=255) tGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTGATGTTACCAACAATGa > 1:3472262/1‑70 (MQ=255) caTGCGTTGCCGCATCAGTGATCAGCCACAGTgtcactttcattgttggtaacatcaatctgaatggtgg > 1:2385814‑M1/1‑32 (MQ=255) caTGCGTTGCCGCATCAGTGATCAGCCACAGTgtcactttcattgttggtaacatcaatctgaatggtgg > 1:2140132‑M1/1‑32 (MQ=255) caTGCGTTGCCGCATCAGTGATCAGCCACAGTgtcactttcattgttggtaacatcaatctgaatggtgg > 1:47100‑M1/1‑32 (MQ=255) caTGCGTTGCCGCATCAGTGATCAGCCACAGTgtcactttcattgttggtaacatcaatctgaatggtgg > 1:2888272‑M1/1‑32 (MQ=255) aTGCGTTGCCGCATCAGTGATCAGCCACAGTgtcactttcattgttggtaacatcaatctgaatggtgga > 1:1251973‑M1/1‑31 (MQ=255) aTGCGTTGCCGCATCAGTGATCAGCCACAGTgtcactttcattgttggt > 1:3680918‑M1/1‑31 (MQ=255) tGCGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTGATGTTACCAACAATGACAGTGac < 1:1423/71‑1 (MQ=255) gCGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTGATGTTACCAACAATGAAAGTGACa < 1:262323‑M2/71‑2 (MQ=255) cGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTGATGTTACCAACAATGAAAGTGACa > 1:3175413‑M2/1‑69 (MQ=255) cGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTGATGTTACCAACAATGAAAGTGACa > 1:443826‑M2/1‑69 (MQ=255) cGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTGATGTTACCAACAATGAAAGTGACa > 1:3363071‑M2/1‑69 (MQ=255) cGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTGATGTTACCAACAATGAAAGTGACa > 1:2493119‑M2/1‑69 (MQ=255) gTTGCCGCATCAGTGATCAGCCACAGTgtcactttcattgttggtaacatcaatctgaatggtggaaaact < 1:875280‑M1/71‑45 (MQ=255) gTTGCCGCATCAGTGATCAGCCACAGTTTTccacca < 1:3612720/36‑1 (MQ=255) gTTGCCGCATCAGTGATCAGCCACAGTTTTccacca < 1:2237905/36‑1 (MQ=255) gTTGCCGCATCAGTGATCAGCCACAGTTTTccacca < 1:1254224/36‑1 (MQ=255) gTTGCCGCATCAGTGATCAGCCACAGTTTTccacca < 1:5259/36‑1 (MQ=255) ttGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTGATGTTACCAACAATGaaa < 1:1262676/62‑1 (MQ=255) ttGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTGATGTTACCAACAATGaaa < 1:2229770/62‑1 (MQ=255) ttGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTGATGTTACCAACAATGAAAGTGACactg > 1:501022‑M2/1‑67 (MQ=255) gCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTGATGTTACCAACAATGAAAGTGACactgt < 1:1795080‑M2/70‑6 (MQ=255) cGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTGATGTTACCAACAATGAAAGTGACACTGTc < 1:3375356/69‑1 (MQ=255) cGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTGATGTTACCAACAATGAAAGTGACACTGTc < 1:1296643/69‑1 (MQ=255) cATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTGATGTTACCAACAATGAAAGTGACACTGTCAc > 1:174018/1‑69 (MQ=255) cATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTGATGTTACCAACAATGAAAGTGACACTGTCAc > 1:2934279/1‑69 (MQ=255) cATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTGATGTTACCAACAATGAAAGTGACACTGTCAc > 1:1741071/1‑69 (MQ=255) tCAGTGATCAGCCACAGTTTTCCACGATTCAGATTGATGTAACCAACAATGAAAGTGACACTGTCACCtat > 1:655562/1‑69 (MQ=255) aGTGATCAGCCACAGTTTTCCACCATTCAGATTGATGTTACCAACAATGAAAGTGACACTGTCACCtttt < 1:1581607/70‑1 (MQ=255) tCAGCCACAGTTTTCCACCATTCAGATTGATGTTACCAACAATGAAAGTGACACTGTCACCTTTTACCGTa < 1:945585/71‑1 (MQ=255) tCAGCCACAGTTTTCCACCATTCAGATTGATGTTACCAACAATGAAAGTGACACTGTCACCTTTTACCGTa < 1:879608/71‑1 (MQ=255) tCAGCCACAGTTTTCCACCATTCAGATTGATGTTACCAACAATGAAAGTGACACTGTCACCTTTTACCGTa < 1:18164/71‑1 (MQ=255) tCAGCCACAGTTTTCCACCATTCAGATTGATGTTACCAACAATGAAAGTGACACTGTCACCTTTTACCGTa < 1:1329044/71‑1 (MQ=255) cAGCCACAGTTTTCCACCATTCAGATTGATGTTACCAACAATGAAAGTGACACTGTCACCTTTTACCGTAc > 1:2266013/1‑71 (MQ=255) cAGCCACAGTTTTCCACCATTCAGATTGATGTTACCAACAATGAAAGTGACACTGTCACCTTTTACCGTAc > 1:265837/1‑71 (MQ=255) aGCCACAGTTTTCCACCATTCAGATTGATGTTAcc > 1:2015103/1‑35 (MQ=255) aGCCACAGTTTTCCACCATTCAGATTGATGTTAcc > 1:2841754/1‑35 (MQ=255) aGCCACAGTTTTCCACCATTCAGATTGATGTTAcc > 1:2298602/1‑35 (MQ=255) aGCCACAGTTTTCCACCATTCAGATTGATGTTAcc > 1:725213/1‑35 (MQ=255) aGCCACAGTTTTCCACCATTCAGATTGATGTTACCAACAATGAAAGTGACACTGTCACCTTTTACCGTACt > 1:798382/1‑71 (MQ=255) cacaGTTTTCCACCATTCAGATTGATGTTACCAACAATGAAAGTGACACTGTCACCTTTTACCGTACTGcc < 1:710802/71‑1 (MQ=255) acaGTgtcactttcattgttggtaacatcaatctgaatggtggaaaactgtggctgatcactgatgcggc < 1:1795080‑M1/70‑66 (MQ=255) acaGTTTTCCACCATTCAGATTGATGTTACCAACAATGAAAGTGACACTGTCACCTTTTACCGTACTGCCg > 1:1079552/1‑71 (MQ=255) caGTgtcactttcattgttggtaacatcaatctgaatggtggaaaactgtggctgatcactgatgcggcaa > 1:2641646‑M1/1‑4 (MQ=255) caGTTTTCCACCATTCAGATTGATGTTACCAACAATGAAAGTGACACTGTCACCTTTTACCGTACTGCCg > 1:3006984/1‑70 (MQ=255) caGTTTTCCACCATTCAGATTGATGTTACCAACAATGAAAGTGACACTGTCACCTTTTACCGTACTGCCGt > 1:2290374/1‑71 (MQ=255) aGTgtcactttcattgttggtaacatcaatctgaatggtggaaaactgtggctgatcactgatgcggcaac < 1:2893906‑M1/71‑69 (MQ=255) aGTTTTCCACCATTCAGATTGATGTTACCAACAATGAAAGTGACactgtggctgatcactgatgcggcaac < 1:875280‑M2/71‑28 (MQ=255) aGTTTTCCACCATTCAGATTGATGTTACCAACAATGAAAGTGACACTGTCACCTTTTa < 1:3067318/58‑1 (MQ=255) aGTTTTCCACCATTCAGATTGATGTTACCAACAATGAAAGTGACACTGTCACCTTTTACCGTACTGCCGt > 1:788163/1‑70 (MQ=255) aGTTTTCCACCATTCAGATTGATGTTACCAACAATGAAAGTGACACTGTCACCTTTTACCGTACTGCCGTc > 1:1041834/1‑71 (MQ=255) aGTTTTCCACCATTCAGATTGATGTTACCAAC‑‑‑GAAAGTGACACTGTCACCTTTTACCGTACTGCCGTCTAg < 1:1397136/71‑1 (MQ=255) gTTTTCCACCATTCAGATTGATGTTACCAACAATGAAAGTGACACTGTCAc < 1:3295042/51‑1 (MQ=255) gTTTTCCACCATTCAGATTGATGTTACCAACAATGAAAGTGACACTGTCACCTTTTACCGTACTGCCGTc > 1:2406711/1‑70 (MQ=255) ttttCCACCATTCAGATTGATGTTACCAACAATGAAAGTGACACTGTCACCt < 1:649734/52‑1 (MQ=255) ttttCCACCATTCAGATTGATGTTACCAACAATGAAAGTGACACTGTCACCt < 1:155953/52‑1 (MQ=255) ttttCCACCATTCAGATTGATGTTACCAACAATGAAAGTGACACTGTCACCTTTTACCGTACTGCCGTCTa < 1:2731054/71‑1 (MQ=255) ttttCCACCATTCAGATTGATGTTACCAACAATGAAAGTGACACTGTCACCTTTTACCGTACTGCCGTCTa < 1:1357187/71‑1 (MQ=255) ttttCCACCATTCAGATTGATGTTACCAACAATGAAAGTGACACCGTCACCt < 1:704797/52‑1 (MQ=255) tgtcactttcattgttggtaacatcaatctgaatggtggaaaactgtggctgatcactgatgcggcaacgc < 1:262323‑M1/71‑71 (MQ=255) tgtcactttcattgttggtaacatcaatctgaatggtggaaaactgtggctgatcactgatgcggcaacg > 1:443826‑M1/1‑1 (MQ=255) tgtcactttcattgttggtaacatcaatctgaatggtggaaaactgtggctgatcactgatgcggcaacg > 1:3363071‑M1/1‑1 (MQ=255) tgtcactttcattgttggtaacatcaatctgaatggtggaaaactgtggctgatcactgatgcggcaacg > 1:3175413‑M1/1‑1 (MQ=255) | CCCTCTCCGCGCAGGCGTTTCACTTTCAGTTGCACATGCGTTGCCGCATCAGTGATCAGCCACAGTTTTCCACCATTCAGATTGATGTTACCAACAATGAAAGTGACACTGTCACCTTTTACCGTACTGCCGTCTAG > minE/1072740‑1072876 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |