| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1102207 | 105 (1.780) | 7 (0.130) | 5/92 | NT | 6.3% | coding (728/867 nt) | ydiB | quinate/shikimate 5‑dehydrogenase, NAD(P)‑binding |
| ? | minE | = 1102226 | 113 (2.120) | coding (747/867 nt) | ydiB | quinate/shikimate 5‑dehydrogenase, NAD(P)‑binding | |||||
Only 100 of 148 total aligned reads displayed.
TCAGTCTGTTACATCCGGGACTTCTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACGGCATGTTGTTGTGGCAAGGGGCTGAACAG > minE/1102138‑1102277 | tCAGTCTGTTACATCCGGGACTTCTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTgcag > 1:1380500/1‑71 (MQ=255) cTGTTACATCCGGGACTTCTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGgc > 1:382714/1‑71 (MQ=255) tGTTACATCCGGGACTTCTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGgcg > 1:2579750/1‑71 (MQ=255) tGTTACATCCGGGACTTCTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGgcg > 1:1576189/1‑71 (MQ=255) ttACATCCGGGACTTCTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGca < 1:771665/71‑1 (MQ=255) tACATCCGGGACTTCTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGcaa > 1:1851732/1‑71 (MQ=255) aCATCCGGGACTTCTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGcaa > 1:1886686/1‑70 (MQ=255) aCATCCGGGACTTCTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGcaa > 1:1497643/1‑70 (MQ=255) cATCCGGGACTTCTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGcaac < 1:1274305/70‑1 (MQ=255) aTCCGGGACTTCTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGcaacaa < 1:1955623/71‑1 (MQ=255) tCCGGGACTTCTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAg < 1:92260/71‑1 (MQ=255) tCCGGGACTTCTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAg < 1:2765933/71‑1 (MQ=255) ccGGGACTTCTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGc > 1:2356881/1‑71 (MQ=255) cGGGACTTCTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGc < 1:983561/70‑1 (MQ=255) cGGGACTTCTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCt > 1:3165603/1‑71 (MQ=255) cGGGACTTCTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCt < 1:3160512/71‑1 (MQ=255) cGGGACTTCTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCt > 1:42122/1‑71 (MQ=255) gggACTTCTGGTCACTGAATGCGTGTATAACCCGCATATGCCGAAGTTATTGCAGCAGGCGcaa > 1:507838/1‑64 (MQ=255) gggACTTCTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGcaac > 1:122927/1‑65 (MQ=255) ggACTTCTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTgg < 1:2764751/71‑1 (MQ=255) ggACTTCTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTgg < 1:1662868/71‑1 (MQ=255) gACTTCTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGt < 1:1891850/71‑1 (MQ=255) aCTTCTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAaccagcttgttgcgcctgct < 1:1964433‑M1/71‑21 (MQ=255) aCTTCTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTt > 1:217537‑M2/1‑70 (MQ=255) cTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAaccagcttgttgcgcctgctgcaa > 1:1625977‑M1/1‑47 (MQ=255) cTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTtgca < 1:154421‑M2/70‑5 (MQ=255) cTGCTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTtgca < 1:2812856‑M2/70‑5 (MQ=255) gTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAaccagcttgttgcgcctgctgcaa < 1:294273‑M1/68‑25 (MQ=255) gTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTtgcaa > 1:228338‑M2/1‑63 (MQ=255) gTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTtgcaa > 1:1165351‑M2/1‑63 (MQ=255) gTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAAc > 1:170764/1‑71 (MQ=255) tGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGAtt > 1:1757111/1‑70 (MQ=255) tGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGAtt > 1:661147/1‑70 (MQ=255) gAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGa > 1:322633/1‑71 (MQ=255) aaTGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAAc < 1:3617815/64‑1 (MQ=255) aaTGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGAt > 1:2854663/1‑71 (MQ=255) aaTGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGAt > 1:1522546/1‑71 (MQ=255) aaTGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGAt > 1:239937/1‑71 (MQ=255) aTGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATg < 1:2146374/71‑1 (MQ=255) tGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGcaac > 1:2159902/1‑46 (MQ=255) tGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATgg < 1:3309387/71‑1 (MQ=255) tGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATg > 1:3352976/1‑70 (MQ=255) tGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATg > 1:1133321/1‑70 (MQ=255) gtgtATAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGa > 1:3718597/1‑69 (MQ=255) gtgtATAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGa > 1:1200860/1‑69 (MQ=255) tgtgTAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATAc < 1:581252/71‑1 (MQ=255) tgtATAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATAc < 1:1108550/71‑1 (MQ=255) tgtATAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATAc < 1:1243118/71‑1 (MQ=255) tgtATAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATAc < 1:889102/71‑1 (MQ=255) gtATAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACg > 1:454498/1‑71 (MQ=255) tataACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACgg > 1:2421635/1‑71 (MQ=255) tataACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACg < 1:631882/70‑1 (MQ=255) ataACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGa > 1:981850/1‑57 (MQ=255) aaCCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACGGCAt > 1:429537/1‑71 (MQ=255) aCCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACGGCAtg > 1:507369/1‑71 (MQ=255) cccGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACGGCAtgt > 1:2182547/1‑71 (MQ=255) cccGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACGGCAtgt > 1:2924160/1‑71 (MQ=255) gCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACGGCAtgttgt > 1:2643953/1‑71 (MQ=255) atatGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACGGCAtgttgttg < 1:146436/71‑1 (MQ=255) atatGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACGGCAtgttgttg < 1:3365658/71‑1 (MQ=255) tatGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACGGCAtgtt < 1:549798/66‑1 (MQ=255) atGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACGGCATGTTGTtgtg > 1:1049368/1‑71 (MQ=255) tGACGAAGTTATTGCAaccagcttgttgcgcctgct > 1:2865128‑M1/1‑16 (MQ=255) tGACGAAGTTATTGCAaccagcttgttgcgcctgct > 1:969059‑M1/1‑16 (MQ=255) tGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACGGCagg > 1:24745/1‑60 (MQ=255) tGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACGGCAtg > 1:1935335/1‑62 (MQ=255) aCGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACGGCATGTTGTTGTGGc > 1:1999339/1‑70 (MQ=255) cGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATg > 1:1316740/1‑48 (MQ=255) cGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACGGCATGTTGTTGTGGc > 1:828345/1‑69 (MQ=255) gAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACGGCATGTTGTTGTGGCAAg < 1:522536/71‑1 (MQ=255) aaGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACGGCATGTTGTTGTGGCAAgg < 1:405234/71‑1 (MQ=255) aGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACGGCATGTTGTTGTGGCAAggg < 1:1078162/71‑1 (MQ=255) aGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACGGCATGTTGTTGTGGCAAggg > 1:422703/1‑71 (MQ=255) aGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACGGCATGTTGTTGTGGCAAggg > 1:1301802/1‑71 (MQ=255) aGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACGGCATGTTGTTGTGGCAAggg > 1:2981433/1‑71 (MQ=255) aGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACGGCATGTTGTTGTGGCAAggg > 1:178940/1‑71 (MQ=255) gTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGa < 1:2878512/38‑1 (MQ=255) gTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACGGCATGTTGTTGTGGCAAgggg < 1:1672284/71‑1 (MQ=255) ttATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACGGGATGTTGTTGTGGCAAGGGGc > 1:1856867/1‑71 (MQ=255) ttATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACGGCATGTTGTTGTGGCAAGGGGc > 1:2747929/1‑71 (MQ=255) tATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGa > 1:255076/1‑36 (MQ=255) tATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGa > 1:2682606/1‑36 (MQ=255) tATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATa > 1:495389/1‑46 (MQ=255) tATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATa > 1:878291/1‑46 (MQ=255) tATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATa > 1:1605995/1‑46 (MQ=255) aTTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACGGCAtgt < 1:2976018/53‑1 (MQ=255) aTTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACGGCAtgt < 1:2016793/53‑1 (MQ=255) aTTGAAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACGGCAtgt < 1:108636/53‑1 (MQ=255) ttGCAaccagcttgttgcgcctgctgcaataacttcgtcatatgcgggttatacacgcattcagtgac > 1:403530‑M1/1‑5 (MQ=255) ttGCAaccagcttgttgcgcctgctgcaataacttcgtcatatgcgggttatacacgcattcagtgac > 1:228338‑M1/1‑5 (MQ=255) ttGCAGCAGGCGCAACAAGCTGGTtgcaataacttcgtcatatgcgggttatacacgcattcagtgac < 1:294273‑M2/68‑45 (MQ=255) ttGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACGGCATGTTGTTGTGGCAAGGGGCTg > 1:2665399/1‑70 (MQ=255) ttGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACGGCATGTTGTTGTGGCAAGGGGCTg > 1:2367042/1‑70 (MQ=255) tGCAaccagcttgttgcgcctgctgcaataacttcgtcatatgcgggttatacacgcattcagtgagcag < 1:2812856‑M1/70‑67 (MQ=255) gcagcaGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACGGCATGTTGTTGTGGCAAGGGGCTGaa < 1:3678717/70‑1 (MQ=255) gCAaccagcttgttgcgcctgctgcaataacttcgtcatatgcgggttataca > 1:1085801‑M1/1‑3 (MQ=255) agcagGCGCAACAAGCTGGTtgcaataacttcgtcatatgcgggttatacacgcattcagtgaccagaagt < 1:1964433‑M2/71‑52 (MQ=255) agcagGCGCAACAAGCTGGTtgcaataacttcgtcatatgcgggttatacacgcattcagtgaccagaagt < 1:516643‑M2/71‑52 (MQ=255) agcagGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACGGCATGTTGTTGTGGCAAGGGGCTGAACAg < 1:1096256/71‑1 (MQ=255) agcagGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACGGCATGTTGTTGTGGCAAGGGGCTGAACAg < 1:1253077/71‑1 (MQ=255) | TCAGTCTGTTACATCCGGGACTTCTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACGGCATGTTGTTGTGGCAAGGGGCTGAACAG > minE/1102138‑1102277 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |