| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1275427 = | 73 (1.240) | 4 (0.080) | 3/82 | NT | 7.6% | intergenic (+91/‑252) | yodA/yodB | conserved metal‑binding protein/predicted cytochrome |
| ? | minE | 1275460 = | 39 (0.820) | intergenic (+124/‑219) | yodA/yodB | conserved metal‑binding protein/predicted cytochrome | |||||
Only 100 of 107 total aligned reads displayed.
GATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACCAATA > minE/1275358‑1275494 | gATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAagctagct > 1:1343354/1‑70 (MQ=255)gATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAgctagcta < 1:89993/71‑1 (MQ=255) aTGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTAc < 1:3075901/71‑1 (MQ=255) tctctgttggccgtattgtgtatggaatccgttattggttaactcaatgcgggttagcttattaatata > 1:2050539‑M1/68‑69 (MQ=255) tctctgttggccgtattgtgtatggaatccgttattggttaactcaatgcgggttagcttattaatat > 1:236947‑M1/68‑68 (MQ=255) tGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAgctagcta > 1:3253229/1‑69 (MQ=255) tGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACa < 1:479232/71‑1 (MQ=255) tGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACa < 1:2963677/71‑1 (MQ=255) tGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACa < 1:1950997/71‑1 (MQ=255) ctgttggcagtattgtgtatggaatccgttattggttaactcaatgcgggttagcttattaataTACAGa < 1:2656485‑M1/6‑1 (MQ=255) cGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGac < 1:2123140/71‑1 (MQ=255) cGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGac < 1:3679367/71‑1 (MQ=255) tAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACg < 1:1112912/69‑1 (MQ=255) aGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAgctagcta > 1:1556462/1‑60 (MQ=255) tAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCtcat < 1:443233/71‑1 (MQ=255) tAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCtcat < 1:1384155/71‑1 (MQ=255) aGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCtcatca > 1:188273/1‑71 (MQ=255) aGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCtcatc < 1:794814/70‑1 (MQ=255) gTTATCATAACTGCCACTGGTCCATCCACAAACGCCTCTGAACGCAAGCTAGCTACAGACACGCTCATCAc < 1:1373728/71‑1 (MQ=255) gTTATCATAACTGCCACTGGTCCATCCACAAACGCCTCTGAACGCAAGCTAGCTACAGACACGCTCATCAc < 1:1378135/71‑1 (MQ=255) gTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCAc < 1:204891/71‑1 (MQ=255) ttgtgtatggaatccgttattggttaactcaatgcgggttagcttattaatata > 1:1738663‑M1/53‑54 (MQ=255) ttATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACt < 1:2931188/71‑1 (MQ=255) aTCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTa < 1:54819/70‑1 (MQ=255) aTCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTa < 1:2244543/70‑1 (MQ=255) aTCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTa < 1:522111/70‑1 (MQ=255) aTCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTa < 1:59220/70‑1 (MQ=255) aTCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTa < 1:1896768/70‑1 (MQ=255) aTCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTa < 1:389791/70‑1 (MQ=255) aTCATAACTCCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTa < 1:3734562/70‑1 (MQ=255) tCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTAt < 1:1315159/70‑1 (MQ=255) tCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTAt > 1:1550254/1‑70 (MQ=255) tCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTAt < 1:2046069/70‑1 (MQ=255) cATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGa > 1:1348591/1‑71 (MQ=255) cATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGa > 1:1352951/1‑71 (MQ=255) aTAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGAc > 1:1326433/1‑71 (MQ=255) aTAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGAc > 1:803973/1‑71 (MQ=255) tggaatccgttattggttaactcaatgcgggttagcttattaataTACa < 1:2862562‑M1/4‑1 (MQ=255) aCTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACgt < 1:1980810/70‑1 (MQ=255) gaatccgttattggttaactcaatgcgggttagcttattaataTACAGaca < 1:2182280‑M1/8‑1 (MQ=255) gaatccgttattggttaactcaatgcgggttagcttattaataTACAGaca < 1:3470302‑M1/8‑1 (MQ=255) gaatccgttattggttaactcaatgcgggttagcttattaataTACAGACACGCTCATCACTATGACgtgt < 1:1393826‑M1/28‑1 (MQ=255) cTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACgtgt < 1:511995/71‑1 (MQ=255) cTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACgtgt > 1:2580893/1‑71 (MQ=255) ccACTGGTCCATCCACAAACGCCACTGAACGCAagctagct < 1:1781820/41‑1 (MQ=255) ccACTGGTCCATCCACAAACGCCACTGAACGCAagctagct < 1:765087/41‑1 (MQ=255) ccACTGGTCCATCCACAAACGCCACTGAACGCAagctagct < 1:3585664/41‑1 (MQ=255) ccACTGGTCCATCCACAAACGCCACTGAACGCAagctagct < 1:897673/41‑1 (MQ=255) ccACTGGTCCATCCACAAACGCCACTGAACGCAagctagct < 1:1502846/41‑1 (MQ=255) ccACTGGTCCATCCACAAACGCCACTGAACGCAagctagct < 1:2639323/41‑1 (MQ=255) ccACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCt < 1:363474/70‑1 (MQ=255) ccACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTg > 1:1913187/1‑71 (MQ=255) ccACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTg > 1:182643/1‑71 (MQ=255) cACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACa < 1:74544/43‑1 (MQ=255) cACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTg > 1:3041318/1‑70 (MQ=255) gttattggttaactcaatgcgggttagcttattaataTACAGACACGCTCATCACTATGACGTGTCTGt < 1:2145909‑M1/32‑1 (MQ=255) ggTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGtata > 1:2700976/1‑70 (MQ=255) ggTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGtat > 1:860474/1‑69 (MQ=255) gTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGGTCATCACTATGACGTGTCTGTatat < 1:70491/70‑1 (MQ=255) gTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTatat > 1:1993516/1‑70 (MQ=255) ccatccaCAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATtaa > 1:3448819/1‑71 (MQ=255) catccaCAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATtaa > 1:177438/1‑70 (MQ=255) tccaCAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTAt < 1:259010/50‑1 (MQ=255) ccaCAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAg > 1:3535424/1‑71 (MQ=255) ccaCAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAg > 1:3365730/1‑71 (MQ=255) cacaAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATGTTAATAAGc > 1:772835/1‑71 (MQ=255) cacaAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAg > 1:1208381/1‑70 (MQ=255) cacaAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAg < 1:2482915/70‑1 (MQ=255) cacaAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGc > 1:2772693/1‑71 (MQ=255) acaAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACgt > 1:1961637/1‑52 (MQ=255) acaAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGc > 1:3087838/1‑70 (MQ=255) acaAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGc > 1:3683460/1‑70 (MQ=255) acaAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGc > 1:271359/1‑70 (MQ=255) acaAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCt < 1:3633414/71‑1 (MQ=255) ctcaatgcgggttagcttattaataTACAGACACg > 1:3424001‑M1/26‑35 (MQ=255) ctcaatgcgggttagcttattaataTACAGACACg > 1:1947667‑M1/26‑35 (MQ=255) caAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGtata > 1:3475729/1‑60 (MQ=255) caAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCt > 1:2673608/1‑70 (MQ=255) caAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCt > 1:2197903/1‑70 (MQ=255) caAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTa < 1:2988160/71‑1 (MQ=255) caAACCCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGtata > 1:2093712/1‑60 (MQ=255) cACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCa < 1:1912036/71‑1 (MQ=255) cACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCa < 1:211695/71‑1 (MQ=255) cACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCa < 1:760082/71‑1 (MQ=255) cTGAACGCAAGCTATCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCAt > 1:3140463/1‑70 (MQ=255) cTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTaa > 1:600218/1‑63 (MQ=255) cTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCAtt > 1:2571127/1‑71 (MQ=255) ttagcttattaataTACAGACACGCTCATCACTATg < 1:265660‑M1/22‑1 (MQ=255) ttagcttattaataTACAGACACGCTCATCACTATg < 1:2034318‑M1/22‑1 (MQ=255) aaCGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCAtt > 1:2820085/1‑68 (MQ=255) aaCGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAg > 1:1839360/1‑71 (MQ=255) aaCGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAg > 1:1375398/1‑71 (MQ=255) aaCGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAg > 1:2171577/1‑71 (MQ=255) aCGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGt > 1:3681860/1‑71 (MQ=255) cGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCAt > 1:2561220/1‑65 (MQ=255) cAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTaa < 1:3607981/71‑1 (MQ=255) cAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTaa < 1:2990975/71‑1 (MQ=255) gctaCAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACCAAt < 1:2490033/69‑1 (MQ=255) gctaCAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACCAAt < 1:1859795/69‑1 (MQ=255) gctaCAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACCAATa < 1:875034/70‑1 (MQ=255) | GATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACCAATA > minE/1275358‑1275494 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |