| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2437945 = | 54 (0.920) | 5 (0.090) | 3/94 | NT | 10.1% | intergenic (‑9/‑208) | rep/yifN | DNA helicase and single‑stranded DNA‑dependent ATPase/ECK3769:JW3750:b3777; conserved hypothetical protein |
| ? | minE | 2437979 = | 39 (0.720) | intergenic (‑43/‑174) | rep/yifN | DNA helicase and single‑stranded DNA‑dependent ATPase/ECK3769:JW3750:b3777; conserved hypothetical protein | |||||
AGCACCAGGCAGGGGCCGGTAACGAATTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCT > minE/2437875‑2438013 | ctctctctgatttaaacatccgcagccaaccggttagcggcttacacgcggtcacattcaaatgcgattct < 1:2149992‑M1/1‑1 (MQ=255)ctctctctgatttaaacatccgcagccaaccggttagcggcttacacgcggtcacattcaaatgcgattct < 1:1409636‑M1/1‑1 (MQ=255)ctctctctgatttaaacatccgcagccaaccggttagcggcttacacgcggtcacattcaaatgcgattct < 1:2894966‑M1/1‑1 (MQ=255)aGCACCAGGCAGGGGCCGGTAACGAATTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTAtt > 1:2412402/1‑71 (MQ=255) tctctgatttaaacatccgcagccaaccggttagcggcttacacgcggtcacattcaaatgcgattcTg > 1:717980‑M1/68‑69 (MQ=255) tctctgatttaaacatccgcagccaaccggttagcggcttacacgcggtcacattcaaatgcgattcTGc < 1:733852‑M1/3‑1 (MQ=255) aCCAGGCAGGGGCCGGTAACGAATTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCt > 1:2314982/1‑71 (MQ=255) aggcaggGGCCGGTAACGAATTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCaa < 1:629501/71‑1 (MQ=255) aggcaggGGCCGGTAACGAATTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCaa < 1:3419112/71‑1 (MQ=255) ggcaggGGCCGGTAACGAATTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAAt > 1:738564/1‑71 (MQ=255) gcaggGGCCGGTAACGAATTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATc > 1:3494306/1‑71 (MQ=255) caggGGCCGGTAACGAATTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCt < 1:3515910/71‑1 (MQ=255) aggGGCCGCTAACGAATTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCtt > 1:958239/1‑71 (MQ=255) gggCCGGTAACGAATTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTc > 1:1806239/1‑70 (MQ=255) ccGGTAACGAATTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAAc > 1:3509912/1‑71 (MQ=255) ccGGTAACGAATTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAAc > 1:3514135/1‑71 (MQ=255) cGGTAACGAATTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCtt > 1:299496/1‑65 (MQ=255) cGGTAACGAATTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACg < 1:3462421/71‑1 (MQ=255) cGGTAACGAATTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACg > 1:2675272/1‑71 (MQ=255) aaCGAATTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACggggg > 1:2215146/1‑71 (MQ=255) aCGAATTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACggggg < 1:2896861/70‑1 (MQ=255) aTTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGggagga < 1:1711336/71‑1 (MQ=255) tCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGAtt > 1:791108/1‑71 (MQ=255) cGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTg > 1:2340651/1‑71 (MQ=255) gACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTg < 1:2026299/70‑1 (MQ=255) gACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTg < 1:379620/70‑1 (MQ=255) gACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGt < 1:1534086/71‑1 (MQ=255) cggttagcggcttacacgcggtcacattcaaatgcgattcTGCTCAATCTTCGAACGGGGGGAGGATTGTa > 1:3589219‑M1/41‑71 (MQ=255) cggttagcggcttacacgcggtcacattcaaatgcgattcTGCTCAATCTTCGAACGGGGGGAGGATTGTa > 1:1720453‑M1/41‑71 (MQ=255) tgttgttgGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACggggg < 1:2335406/55‑1 (MQ=255) tgttgttgGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGaa > 1:269129/1‑71 (MQ=255) gttgttgGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCg < 1:1115679/46‑1 (MQ=255) gttgttgGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCg < 1:1156792/46‑1 (MQ=255) gttgttgGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCg < 1:1431661/46‑1 (MQ=255) gttgttgGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAAt > 1:3058457/1‑71 (MQ=255) ttgttgGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGgga > 1:1651658/1‑55 (MQ=255) ggCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCAtt > 1:5716/1‑71 (MQ=255) gCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCAtt < 1:922021/70‑1 (MQ=255) ccGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTg < 1:238278/71‑1 (MQ=255) ggggTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGggagga < 1:1759438/49‑1 (MQ=255) gtcacattcaaatgcgattcTGCTCAATCTTCGAACGGGGGGAGGAtt > 1:1745924‑M1/21‑48 (MQ=255) gTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAAtgt < 1:599109/71‑1 (MQ=255) gTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAAtgt < 1:1273618/71‑1 (MQ=255) tttAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTg < 1:234002/65‑1 (MQ=255) ttAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGa < 1:1886809/54‑1 (MQ=255) cacattcaaatgcgattcTGCTCAATCTTCGAACGGGGGGAGGATTg < 1:1095566‑M1/29‑1 (MQ=255) cacattcaaatgcgattcTGCTCAATCTTCGAACGGGGGGAGGATTGt < 1:1471052‑M1/30‑1 (MQ=255) tAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGAc > 1:2925849/1‑71 (MQ=255) aGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAAt > 1:66347/1‑54 (MQ=255) aGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGAcc > 1:835579/1‑71 (MQ=255) gACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGaa < 1:2623961/52‑1 (MQ=255) aCGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACcgc > 1:599854/1‑71 (MQ=255) gCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCgt > 1:1210389/1‑71 (MQ=255) gCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCgt > 1:2665603/1‑71 (MQ=255) cATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCgtg < 1:1885931/71‑1 (MQ=255) aTAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGaa > 1:743254/1‑58 (MQ=255) aTAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGa > 1:1301052/1‑57 (MQ=255) aTAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCgtgt < 1:129889/71‑1 (MQ=255) aTAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCgtg < 1:2925199/70‑1 (MQ=255) tAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTa < 1:1251771/71‑1 (MQ=255) tAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTa < 1:3302358/71‑1 (MQ=255) tAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTa < 1:2229252/71‑1 (MQ=255) ggTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAg > 1:817494/1‑71 (MQ=255) gtgtATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGc < 1:2550052/71‑1 (MQ=255) gtgtATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGc < 1:344090/71‑1 (MQ=255) gtgtATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGc < 1:3051962/71‑1 (MQ=255) tATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATc < 1:1673038/42‑1 (MQ=255) ttGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAAtgtg > 1:2793590/1‑53 (MQ=255) ttGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCt > 1:2963/1‑70 (MQ=255) | AGCACCAGGCAGGGGCCGGTAACGAATTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCT > minE/2437875‑2438013 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |