| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2437945 = | 54 (0.920) | 5 (0.090) | 3/94 | NT | 10.1% | intergenic (‑9/‑208) | rep/yifN | DNA helicase and single‑stranded DNA‑dependent ATPase/ECK3769:JW3750:b3777; conserved hypothetical protein |
| ? | minE | 2437979 = | 39 (0.720) | intergenic (‑43/‑174) | rep/yifN | DNA helicase and single‑stranded DNA‑dependent ATPase/ECK3769:JW3750:b3777; conserved hypothetical protein | |||||
TGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTAACCGGTTGGCTGCGGATGTTTAAATCAGAGAGAG > minE/2437911‑2438048 | tgttgttgGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGaa > 1:269129/1‑71 (MQ=255) gttgttgGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAAt > 1:3058457/1‑71 (MQ=255) ggCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCAtt > 1:5716/1‑71 (MQ=255) gCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCAtt < 1:922021/70‑1 (MQ=255) ccGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTg < 1:238278/71‑1 (MQ=255) gTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAAtgt < 1:1273618/71‑1 (MQ=255) gTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAAtgt < 1:599109/71‑1 (MQ=255) tttAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTg < 1:234002/65‑1 (MQ=255) ttAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGa < 1:1886809/54‑1 (MQ=255) tAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGAc > 1:2925849/1‑71 (MQ=255) aGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAAt > 1:66347/1‑54 (MQ=255) aGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGAcc > 1:835579/1‑71 (MQ=255) gACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGaa < 1:2623961/52‑1 (MQ=255) aCGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACcgc > 1:599854/1‑71 (MQ=255) gCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCgt > 1:2665603/1‑71 (MQ=255) gCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCgt > 1:1210389/1‑71 (MQ=255) cATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCgtg < 1:1885931/71‑1 (MQ=255) aTAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGaa > 1:743254/1‑58 (MQ=255) aTAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGa > 1:1301052/1‑57 (MQ=255) aTAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCgtgt < 1:129889/71‑1 (MQ=255) aTAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCgtg < 1:2925199/70‑1 (MQ=255) tAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTa < 1:2229252/71‑1 (MQ=255) tAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTa < 1:3302358/71‑1 (MQ=255) tAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTa < 1:1251771/71‑1 (MQ=255) ggTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAg > 1:817494/1‑71 (MQ=255) gtgtATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGc < 1:3051962/71‑1 (MQ=255) gtgtATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGc < 1:344090/71‑1 (MQ=255) gtgtATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGc < 1:2550052/71‑1 (MQ=255) tATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATc < 1:1673038/42‑1 (MQ=255) ttGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAAtgtg > 1:2793590/1‑53 (MQ=255) ttGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCt > 1:2963/1‑70 (MQ=255) GCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTaa > 1:2227159‑M1/1‑70 (MQ=255) GCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTaa > 1:1217207‑M1/1‑70 (MQ=255) GCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTaa > 1:1082419‑M1/1‑70 (MQ=255) GCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTaa > 1:3255313‑M1/1‑70 (MQ=255) CTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGa > 1:205655‑M1/1‑45 (MQ=255) CTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTAAc > 1:1140490‑M1/1‑70 (MQ=255) tacaatcctccccccgttcgaagattgagcaGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTAACCg > 1:3589219‑M2/32‑71 (MQ=255) tacaatcctccccccgttcgaagattgagcaGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTAACCg > 1:1720453‑M2/32‑71 (MQ=255) TCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTAACCg < 1:1893471‑M1/71‑1 (MQ=255) acaatcctccccccgttcgaagattgagcaGAATCGCATTTGAAtgtg < 1:1471052‑M2/18‑1 (MQ=255) caatcctccccccgttcgaagattgagcaGAATCGCATTTGAAtgtg < 1:1095566‑M2/18‑1 (MQ=255) aaTCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTAACCgg < 1:16262/70‑1 (MQ=255) aaTCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTAACCGGt > 1:2880346/1‑71 (MQ=255) aatcctccccccgttcgaagattgagcaGAATCGCATTTGAATGTGAc > 1:1745924‑M2/29‑48 (MQ=255) aTCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGaa > 1:2584820/1‑42 (MQ=255) aTCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGaa > 1:1613437/1‑42 (MQ=255) tCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTAACCGGTTGGCt > 1:1534548/1‑71 (MQ=255) cGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTAACCGGTTgg < 1:210879/68‑1 (MQ=255) cGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTAACCGGTTGGCt < 1:3573707/70‑1 (MQ=255) aaCGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACcgc > 1:2047534/1‑44 (MQ=255) cGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTAACCGGTTGGCTGCGGa < 1:804022/71‑1 (MQ=255) ggggggAGGATTGTAGCAGAATCGCATTTGAATGTGACCTCGTGTAAGCCGCTAACCGGTTGGCTGCGGAt < 1:2284633/71‑1 (MQ=255) ggggggAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTAACCGGTTGGCTGCGGAt < 1:356048/71‑1 (MQ=255) gggggAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTAACCGGTTGGCTGCg < 1:2322607/67‑1 (MQ=255) gggAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTAACCGGTTGGCTGCGGATGtt < 1:1610057/71‑1 (MQ=255) gaTTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTAACCGGTTGGCTGCGGATGTTTAAAt > 1:3538104/1‑71 (MQ=255) ttGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTAACCGGTTGGCTGCGGATGTTTAAATCa < 1:2363577/71‑1 (MQ=255) tGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTAAcc < 1:2057710/46‑1 (MQ=255) gTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTaa > 1:2130086/1‑43 (MQ=255) gTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTaa > 1:579842/1‑43 (MQ=255) tAGCAGAATCGCATTTGAATGTGACCCCGTGTAAGCCGCTAACCGGTTGGCTGCGGATGTTTAAATCaga < 1:2590839/70‑1 (MQ=255) gcaGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTAACCGGTTGGCTGCGGATGTTTAAATCagaga < 1:733852‑M2/67‑1 (MQ=255) caGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTAACCGGTTGGCTGCGGATGTTTAAATCagaga > 1:717980‑M2/3‑69 (MQ=255) aGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTAACCGGTTGGCTGCGGATGTTTAAATCagagagag < 1:1409636‑M2/70‑1 (MQ=255) aGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTAACCGGTTGGCTGCGGATGTTTAAATCagagagag < 1:2149992‑M2/70‑1 (MQ=255) aGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTAACCGGTTGGCTGCGGATGTTTAAATCagagagag < 1:2894966‑M2/70‑1 (MQ=255) gAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTAACCGGTTGGCTGCGGATGTTTAAATCagagagag < 1:38473/70‑1 (MQ=255) | TGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTAACCGGTTGGCTGCGGATGTTTAAATCAGAGAGAG > minE/2437911‑2438048 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |