| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 2775937 | 36 (0.610) | 7 (0.130) | 3/92 | NT | 16.0% | coding (1749/2187 nt) | arpA | regulator of acetyl CoA synthetase |
| ? | minE | = 2775963 | 41 (0.770) | coding (1723/2187 nt) | arpA | regulator of acetyl CoA synthetase | |||||
AATTTAAACGTATTAAACAGAGTGGGTAATGCGTTAAAAATAGTATTAATAACGTTCATGTGTCCGCGCTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAG > minE/2775869‑2776007 | aaTTTAAACGTATTAAACAGAGTGGGTAATGCGTTAAAAATAGTATTAATAACGTTCATGTGTCCGCGCTg > 1:1218335/1‑71 (MQ=255) aaCGTATTAAACAGAGTGGGTAATGCGTTAAAAATAGTATTAATAACGTTCATGTGTCCGCGCTGCATgg < 1:123377/70‑1 (MQ=255) aaCGTATTAAACAGAGTGGGTAATGCGTTAAAAATAGTATTAATAACGTTCATGTGTCCGCGCTGCATgg < 1:2439249/70‑1 (MQ=255) aCGTATTAAACAGAGTGGGTAATGCGTTAAAAATAGTATTAATAACGTTCATGTGTCCGCGCTGCATGGc > 1:2249479/1‑70 (MQ=255) gTATTAAACAGAGTGGGTAATGCGTTAAAAATAGTATTAATAACGTTCATGTGTCCGCGCTGCATGGCCa > 1:2082044/1‑70 (MQ=255) tATTAAACAGAGTGGGTAATGCGTTAAAAATAGTATTAATAACGTTCATGTGTCCGCGCTGCATGGCCATa < 1:3440602/71‑1 (MQ=255) aaaCAGAGTGGGTAATGCGTTAAAAATAGTATTAATAACGTTCATGTGTCCGCACTGCATGGCCATaaac > 1:1608686/1‑70 (MQ=255) cAGAGTGGGTAATGCGTTAAAAATAGTATTAATAACGTTCATGTGTCCGCGCTGCATGGCCATaaacaaac > 1:181076/1‑71 (MQ=255) cAGAGTGGGTAATGCGTTAAAAATAGTATTAATAACGTTCATGTGTCCGCGCTGCATGGCCATaaacaaac > 1:2832375/1‑71 (MQ=255) gagTGGGTAATGCGTTAAAAATAGTATTAATAACGTTCATGTGTCCGCGCTGCATGGCCATAAACAAAccc > 1:3284876/1‑71 (MQ=255) agTGGGTAATGCGTTAAAAATAGTATTAATAACGTTCATGTGTCCGCGCgacacgggtttgtttatggcca > 1:1384383‑M1/1‑49 (MQ=255) agTGGGTAATGCGTTAAAAATAGTATTAATAACGTTCATGTGTCCGCGCTGCATGGCCATAAACAAACCCg > 1:2787042/1‑71 (MQ=255) gTGGGTAATGCGTTAAAAATAGTATTAATAACGTTCATGTGTCCGCGCTGCATGGCCATAAACAAACCCgt < 1:1847257/71‑1 (MQ=255) gTGGGTAATGCGTTAAAAATAGTATTAATAACGTTCATGTGTCCGCGCTGCATGGCCATAAACAAACCCgt < 1:2944833/71‑1 (MQ=255) gTGGGTAATGCGTTAAAAATAGTATTAATAACGTTCATGTGTCCGCGCTGCATGGCCATAAACAAACCCgt > 1:2777270/1‑71 (MQ=255) tGGGTAATGCGTTAAAAATAGTATTAATAACGTTCATGTGTCCGCGCTGCATGGCCATAAACAAACCCgtg < 1:2092448/71‑1 (MQ=255) ggTAATGCGTTAAAAATAGTATTAATAACGTTCATGTGTCCGCGCTGCATGGCCATAAACAAACCCgtgt < 1:2022165/70‑1 (MQ=255) ggTAATGCGTTAAAAATAGTATTAATAACGTTCATGTGTCCGCGCTGCATGGCCATAAACAAACCCgtgt < 1:674786/70‑1 (MQ=255) gTAATGCGTTAAAAATAGTATTAATAACGTTCATGTGTCCGCGCgacacgggtttgtttatggccatgcag < 1:2520357‑M1/71‑28 (MQ=255) gTAATGCGTTAAAAATAGTATTAATAACGTTCATGTGTCCGCGCgacacgggtttgtttatggccatgcag < 1:1731947‑M1/71‑28 (MQ=255) gTAATGCGTTAAAAATAGTATTAATAACGTTCATGTGTCCGCGCgacacgggtttgtttatggccatgcag < 1:2998089‑M1/71‑28 (MQ=255) tAATGCGTTAAAAATAGTATTAATAACGTTCATGTGTCCGCGCTGc > 1:3016612/1‑46 (MQ=255) tAATGCGTTAAAAATAGTATTAATAACGTTCATGTGTCCGCGCTGc > 1:3155255/1‑46 (MQ=255) tAATGCGTTAAAAATAGTATTAATAACGTTCATGTGTCCGCGCTGc > 1:2535692/1‑46 (MQ=255) aaTGCGTTAAAAATAGTATTAATAACGTTCATGTGTCCGCGCTGCATGGCCATAAACAAACCCGTGTCgcg < 1:277109‑M2/71‑4 (MQ=255) tAAAAATAGTATTAATAACGTTCATGTGTCCGCGCTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGa > 1:624027/1‑71 (MQ=255) aaaaTAGTATTAATAACGTTGATGTGTCCGCGCgacacgggtttgtttatggccatgcagcgcg > 1:2867980‑M1/1‑33 (MQ=255) aaaaTAGTATTAATAACGTTCATGTGTCCGCGCgacacgggtttgtttatggccatgcagcgcg > 1:1357618‑M1/1‑33 (MQ=255) aaaaTAGTATTAATAACGTTCATGTGTCCGCGCgacacgggtttgtttatggccatgcagcgcg > 1:1219816‑M1/1‑33 (MQ=255) aaaaTAGTATTAATAACGTTCATGTGTCCGCGCTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACt > 1:2184790/1‑71 (MQ=255) aaaaTAGTATTAATAACGTTCATGTGTCCGCGCTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACt < 1:2791516/71‑1 (MQ=255) aaaaTAGTATTAATAACGTTCATGTGTCCGCGCTGCATGCCCATa < 1:2733879/45‑1 (MQ=255) aaTAGTATTAATAACGTTCATGTGTCCGCGCTGCATGGCCATaaac > 1:974095/1‑46 (MQ=255) aaTAGTATTAATAACGTTCATGTGTCCGCGCTGCATGGCCATaaac > 1:2204992/1‑46 (MQ=255) aaTAGTATTAATAACGTTCATGTGTCCGCGCTGCATGGCCATaaa > 1:3484652/1‑45 (MQ=255) aaTAGTATTAATAACGTTCATGTGTCCGCGCTGCATGGCCATaaa > 1:2541752/1‑45 (MQ=255) aaTAGTATTAATAACGTTCATGTGTCCGCGCTGCATGGCCATaa > 1:1641618/1‑44 (MQ=255) aaTAGTATTAATAACGTTCATGTGTCCGCGCTGCATGGCCATAAACAAACCCGTGTTGCGCGCAAGACttt < 1:2192929/71‑1 (MQ=255) aaTAGTATTAATAACGTTCATGTGTCCGCGCTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACttt < 1:1549201/71‑1 (MQ=255) aaTAGTATTAATAACGTTCATGTGTCAGCGCTGCATGGCCATaaac > 1:404270/1‑46 (MQ=255) gTATTAATAACGTTCATGTGTCCGCGCTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAg < 1:3712958/70‑1 (MQ=255) ttAATAACGTTCATGTGTCCGCGCTGCATGGCCATAAACAAACCCGTGTCgcgc < 1:3419539‑M2/54‑5 (MQ=255) ttAATAACGTTCATGTGTCAGCGCTGCATGGCCATAAACAAACCCGTGTCgcgc < 1:1323466‑M2/54‑5 (MQ=255) aataaCGTTCATGTGTCCGCGCTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGt > 1:355804/1‑69 (MQ=255) aaCGTTCATGTGTCCGCGCTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGTCag > 1:1178400/1‑69 (MQ=255) aCGTTCATGTGTCCGCGCTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGTCagaa < 1:3239004/70‑1 (MQ=255) aCGTTCATGTGTCCGCGCTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGTCagaa < 1:1105363/70‑1 (MQ=255) aTGTGTCCGCGCTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTa < 1:948053/70‑1 (MQ=255) gtCCGCGCTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGTCaga < 1:3676564/59‑1 (MQ=255) gtCCGCGCTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAata > 1:3262939/1‑71 (MQ=255) cgcgCTGCATGGCCATAAACAAACCCGTGTCgcgcggacacatgaacgttattaatactatttt > 1:1219816‑M2/1‑31 (MQ=255) cgcgCTGCATGGCCATAAACAAACCCGTGTCgcgcggacacatgaacgttattaatactatttt > 1:1357618‑M2/1‑31 (MQ=255) cgcgCTGCATGGCCATAAACAAACCCGTGTCgcgcggacacatcaacgttattaatactatttt > 1:2867980‑M2/1‑31 (MQ=255) cgcgCTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCg < 1:3714086/71‑1 (MQ=255) cgcgCTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCg < 1:3376639/71‑1 (MQ=255) gcgcgacacgggtttgtttatggccatgcagcgctgacacatgaacgttattaa < 1:1323466‑M1/54‑51 (MQ=255) gcgcgacacgggtttgtttatggccatgcagcgcggacacatgaacgttattaa < 1:3419539‑M1/54‑51 (MQ=255) cgcgacacgggtttgtttatggccatgcagcgcggacacatgaacgttattaatactatttttaacgcatt < 1:277109‑M1/71‑69 (MQ=255) cgcTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCgg > 1:795606/1‑70 (MQ=255) cgcTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGa < 1:1265535/71‑1 (MQ=255) cgcTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGa < 1:836835/71‑1 (MQ=255) gcTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATc < 1:2653126/58‑1 (MQ=255) cTGCATGGCCATAAACAAACCCGTGTCgcgcggacacatgaacgttattaatactatttttaacgcattac < 1:2998089‑M2/71‑45 (MQ=255) cTGCATGGCCATAAACAAACCCGTGTCgcgcggacacatgaacgttattaatactatttttaacgcattac < 1:1731947‑M2/71‑45 (MQ=255) cTGCATGGCCATAAACAAACCCGTGTCgcgcggacacatgaacgttattaatactatttttaacgcattac < 1:2520357‑M2/71‑45 (MQ=255) cTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAg > 1:1464296/1‑71 (MQ=255) | AATTTAAACGTATTAAACAGAGTGGGTAATGCGTTAAAAATAGTATTAATAACGTTCATGTGTCCGCGCTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAG > minE/2775869‑2776007 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |