| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 2775937 | 36 (0.610) | 7 (0.130) | 3/92 | NT | 16.0% | coding (1749/2187 nt) | arpA | regulator of acetyl CoA synthetase |
| ? | minE | = 2775963 | 41 (0.770) | coding (1723/2187 nt) | arpA | regulator of acetyl CoA synthetase | |||||
AATGCGTTAAAAATAGTATTAATAACGTTCATGTGTCCGCGCTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTAATTTCCTGGGCTAG > minE/2775896‑2776032 | aaTGCGTTAAAAATAGTATTAATAACGTTCATGTGTCCGCGCTGCATGGCCATAAACAAACCCGTGTCgcg < 1:277109‑M2/71‑4 (MQ=255) tAAAAATAGTATTAATAACGTTCATGTGTCCGCGCTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGa > 1:624027/1‑71 (MQ=255) aaaaTAGTATTAATAACGTTCATGTGTCCGCGCTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACt < 1:2791516/71‑1 (MQ=255) aaaaTAGTATTAATAACGTTCATGTGTCCGCGCTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACt > 1:2184790/1‑71 (MQ=255) aaTAGTATTAATAACGTTCATGTGTCCGCGCTGCATGGCCATAAACAAACCCGTGTTGCGCGCAAGACttt < 1:2192929/71‑1 (MQ=255) aaTAGTATTAATAACGTTCATGTGTCCGCGCTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACttt < 1:1549201/71‑1 (MQ=255) gTATTAATAACGTTCATGTGTCCGCGCTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAg < 1:3712958/70‑1 (MQ=255) ttAATAACGTTCATGTGTCCGCGCTGCATGGCCATAAACAAACCCGTGTCgcgc < 1:3419539‑M2/54‑5 (MQ=255) ttAATAACGTTCATGTGTCAGCGCTGCATGGCCATAAACAAACCCGTGTCgcgc < 1:1323466‑M2/54‑5 (MQ=255) aataaCGTTCATGTGTCCGCGCTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGt > 1:355804/1‑69 (MQ=255) aaCGTTCATGTGTCCGCGCTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGTCag > 1:1178400/1‑69 (MQ=255) aCGTTCATGTGTCCGCGCTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGTCagaa < 1:3239004/70‑1 (MQ=255) aCGTTCATGTGTCCGCGCTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGTCagaa < 1:1105363/70‑1 (MQ=255) aTGTGTCCGCGCTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTa < 1:948053/70‑1 (MQ=255) gtCCGCGCTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGTCaga < 1:3676564/59‑1 (MQ=255) gtCCGCGCTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAata > 1:3262939/1‑71 (MQ=255) cgcgCTGCATGGCCATAAACAAACCCGTGTCgcgcggacacatgaacgttattaatactatttt > 1:1219816‑M2/1‑31 (MQ=255) cgcgCTGCATGGCCATAAACAAACCCGTGTCgcgcggacacatgaacgttattaatactatttt > 1:1357618‑M2/1‑31 (MQ=255) cgcgCTGCATGGCCATAAACAAACCCGTGTCgcgcggacacatcaacgttattaatactatttt > 1:2867980‑M2/1‑31 (MQ=255) cgcgCTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCg < 1:3714086/71‑1 (MQ=255) cgcgCTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCg < 1:3376639/71‑1 (MQ=255) cgcTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCgg > 1:795606/1‑70 (MQ=255) cgcTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGa < 1:836835/71‑1 (MQ=255) cgcTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGa < 1:1265535/71‑1 (MQ=255) gcTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATc < 1:2653126/58‑1 (MQ=255) cTGCATGGCCATAAACAAACCCGTGTCgcgcggacacatgaacgttattaatactatttttaacgcattac < 1:2520357‑M2/71‑45 (MQ=255) cTGCATGGCCATAAACAAACCCGTGTCgcgcggacacatgaacgttattaatactatttttaacgcattac < 1:1731947‑M2/71‑45 (MQ=255) cTGCATGGCCATAAACAAACCCGTGTCgcgcggacacatgaacgttattaatactatttttaacgcattac < 1:2998089‑M2/71‑45 (MQ=255) cTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAg > 1:1464296/1‑71 (MQ=255) tGCATGGCCATAAACAAACCCGTGTCGCTCGCAAGACTTTTAGCGGTCAGAAGATCTa > 1:93470/1‑58 (MQ=255) tGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAg > 1:431511/1‑70 (MQ=255) tGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGc > 1:3083243/1‑71 (MQ=255) tGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGc > 1:356403/1‑71 (MQ=255) tGGCCATAAACAAACCCGTGTCgcgcggacacatgaacgttattaatactatttttaacgcattacccact > 1:1384383‑M2/1‑22 (MQ=255) ggCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGaaa > 1:2918591/1‑71 (MQ=255) gCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAAt < 1:28950/71‑1 (MQ=255) aTAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGTCagaag > 1:3080752/1‑44 (MQ=255) aTAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGt > 1:253767/1‑70 (MQ=255) aaacaaacCCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTaa > 1:3087357/1‑71 (MQ=255) aacaaacCCGTGTCGCGCGCAAGACTTTTAGCGGt > 1:2316872/1‑35 (MQ=255) aacaaacCCGTGTCGCGCGCAAGACTTTTAGCGGt > 1:1960041/1‑35 (MQ=255) aacaaacCCGTGTCGCGCGCAAGACTTTTAGCGGt > 1:592891/1‑35 (MQ=255) aacaaacCCGTGTCGCGCGCAAGACTTTTAGCGGTCagaag > 1:960273/1‑41 (MQ=255) aacaaacCCGTGTCGCGCGCAAGACTTTTAGCGGTCagaag > 1:1368917/1‑41 (MQ=255) aacaaacCCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGaaa > 1:896428/1‑64 (MQ=255) aacaaacCCGTCTCGCGCGCAAGACTTTTAGCGGt > 1:622890/1‑35 (MQ=255) aaacCCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTAATTTc > 1:2001987/1‑71 (MQ=255) aaacCCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTAATTTc > 1:2288246/1‑71 (MQ=255) aacCCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTAATTTcc < 1:685051/71‑1 (MQ=255) aacCCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTAATTTcc > 1:2747012/1‑71 (MQ=255) acCCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGa > 1:771203/1‑51 (MQ=255) acCCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGa > 1:32032/1‑51 (MQ=255) gtgtCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTAATTTCCTGGGc > 1:2236767/1‑71 (MQ=255) tCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTAATTTCCTGGGCTAg > 1:1645722/1‑71 (MQ=255) | AATGCGTTAAAAATAGTATTAATAACGTTCATGTGTCCGCGCTGCATGGCCATAAACAAACCCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTAATTTCCTGGGCTAG > minE/2775896‑2776032 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |