| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2977650 = | 54 (0.920) | 6 (0.110) | 3/94 | NT | 9.7% | coding (628/1938 nt) | slt | lytic murein transglycosylase, soluble |
| ? | minE | 2977677 = | 62 (1.140) | coding (655/1938 nt) | slt | lytic murein transglycosylase, soluble | |||||
CGTATCCGTCTGGCGATGAAAGCGGGTAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCG > minE/2977581‑2977720 | ggtaaaatcggtcgcgccagttgtacgcgcgaaggtcagtaccgtattagggttgttcgccagtgaaatGa > 1:3491781‑M1/70‑71 (MQ=255) gTATCCGTCTGGCGATGAAAGCGGGTAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGAt > 1:1234529/1‑71 (MQ=255) taaaatcggtcgcgccagttgtacgcgcgaaggtcagtaccgtattagggttgttcgccagtgaaatGAtt < 1:3023265‑M1/4‑1 (MQ=255) taaaatcggtcgcgccagttgtacgcgcgaaggtcagtaccgtattagggttgttcgccagtgaaatGAtt < 1:1530640‑M1/4‑1 (MQ=255) tATCCGTCTGGCGATGAAAGCGGGTAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGAt > 1:646872/1‑70 (MQ=255) tCCGTCTGGCGATGAAAGCGGGTAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTAc < 1:1616682/71‑1 (MQ=255) cggtcgcgccagttgtacgcgcgaaggtcagtaccgtattagggttgttcgccagtgaaatGa < 1:3624969‑M1/2‑1 (MQ=255) cTGGCGATGAAAGCGGGTAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGAc > 1:1110419/1‑71 (MQ=255) gCGATGAAAGCGGGTAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTa < 1:821079/70‑1 (MQ=255) gCGATGAAAGCGGGTAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTAt > 1:2601451/1‑71 (MQ=255) gCGATGAAAGCGGGTAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTAt > 1:1372495/1‑71 (MQ=255) gCGATGAAAGCGGGTAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTAt > 1:2596248/1‑71 (MQ=255) gATGAAAGCGGGTAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCg > 1:694374/1‑71 (MQ=255) gAAAGCGGGTAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCt > 1:2100974/1‑71 (MQ=255) gttgtacgcgcgaaggtcagtaccgtattagggttgttcgccagtgaaatg < 1:1917483‑M1/1‑1 (MQ=255) aaGCGGGTAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCg > 1:1821870/1‑71 (MQ=255) tAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCa > 1:2744331/1‑71 (MQ=255) gcgcgaaggtcagtaccgtattagggttgttcgccagtgaaatGATTACCAGACTATCGCCTCGGCAAt > 1:744441‑M1/44‑69 (MQ=255) gcgcgaaggtcagtaccgtattagggttgttcgccagtgaaatGATTACCAGACTATCGCCTCGGCAAt > 1:1784674‑M1/44‑69 (MQ=255) aaCACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCaataat > 1:761843/1‑71 (MQ=255) gcgaaggtcagtaccgtattagggttgttcgccagtgaaatGATTACCAGACTATCGCCTCGGCAATCa < 1:2333219‑M1/28‑1 (MQ=255) gcgaaggtcagtaccgtattagggttgttcgccagtgaaatGATTACCAGACTATCGCCTCGGCAATCa < 1:46566‑M1/28‑1 (MQ=255) gcgaaggtcaggaccgtattagggttgttcgccagtgaaatGATTACCAGACTATCGCCTCGGCAATCa < 1:3353031‑M1/28‑1 (MQ=255) acacAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCAt < 1:1992341/70‑1 (MQ=255) cacaGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCAttt < 1:1619267/71‑1 (MQ=255) cacaGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCAttt < 1:1918193/71‑1 (MQ=255) cacaGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCAttt > 1:995052/1‑71 (MQ=255) cacaGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCAttt < 1:2541195/71‑1 (MQ=255) cacaGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCAttt < 1:2431738/71‑1 (MQ=255) aGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAc > 1:3318306/1‑71 (MQ=255) aGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAc > 1:1166872/1‑71 (MQ=255) aGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAc > 1:1104446/1‑71 (MQ=255) ggCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACt > 1:1789978/1‑71 (MQ=255) ccTGGTAACAGTGCTGGCAGGTCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCaa > 1:244274/1‑59 (MQ=255) ccTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTgg > 1:500563/1‑71 (MQ=255) ccTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTgg > 1:661468/1‑71 (MQ=255) cTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGc > 1:1225903/1‑71 (MQ=255) cTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGc > 1:112183/1‑71 (MQ=255) cTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGc > 1:2585458/1‑71 (MQ=255) tGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATc > 1:2753600/1‑59 (MQ=255) tGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATc > 1:1200159/1‑59 (MQ=255) tGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATc > 1:1930353/1‑59 (MQ=255) aCAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGaacaa < 1:374056/71‑1 (MQ=255) aCAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGaaca < 1:2490695/70‑1 (MQ=255) aGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAAcc > 1:1461233/1‑71 (MQ=255) gTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCAttt < 1:1959709/55‑1 (MQ=255) gTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAAccc > 1:3241426/1‑71 (MQ=255) tGCTGGCAGGGCAGATGCCTGCCGATTACCAGCCTATCGCCTCGGCAATCATTTCACTGGCGAACAAcc > 1:1407155/1‑69 (MQ=255) tGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAAccc > 1:3174268/1‑70 (MQ=255) tGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCt > 1:1892088/1‑71 (MQ=255) gCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCt > 1:926721/1‑70 (MQ=255) agggttgttcgccagtgaaatGATTACCAGACTATCGCCTCGGCAAt < 1:2240133‑M1/26‑1 (MQ=255) cagggcagATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACg > 1:2187651/1‑71 (MQ=255) agggcagATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACgg < 1:2191783/71‑1 (MQ=255) ggcagATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGATCAACCCTAATACGGTa < 1:824921/71‑1 (MQ=255) ggcagATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACTGTa < 1:1111947/71‑1 (MQ=255) cagATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACt > 1:1344021/1‑71 (MQ=255) cagATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACt > 1:1049555/1‑71 (MQ=255) cagATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACt > 1:1020472/1‑71 (MQ=255) cagATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACt > 1:2554059/1‑71 (MQ=255) agATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACt > 1:1375761/1‑70 (MQ=255) agATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACt > 1:512697/1‑70 (MQ=255) agATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACt > 1:518997/1‑70 (MQ=255) gcctgccGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCt > 1:376018/1‑71 (MQ=255) gcctgccGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCt > 1:481838/1‑71 (MQ=255) gcctgccGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCt > 1:262487/1‑71 (MQ=255) gcctgccGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCt > 1:2842845/1‑71 (MQ=255) ccGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTcgcg < 1:1694126/71‑1 (MQ=255) ccGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTcgcg < 1:3574042/71‑1 (MQ=255) ccGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTcgc < 1:2247119/70‑1 (MQ=255) caGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTa < 1:141789‑M1/49‑1 (MQ=255) cGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTcgc > 1:2708008/1‑69 (MQ=255) cGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTcgc > 1:790904/1‑69 (MQ=255) GATTACCAGACTTTCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTcgcgcg > 1:245748‑M1/1‑71 (MQ=255) GATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTcgcgcg > 1:1403083‑M1/1‑71 (MQ=255) | CGTATCCGTCTGGCGATGAAAGCGGGTAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCG > minE/2977581‑2977720 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |