| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2977650 = | 54 (0.920) | 6 (0.110) | 3/94 | NT | 9.7% | coding (628/1938 nt) | slt | lytic murein transglycosylase, soluble |
| ? | minE | 2977677 = | 62 (1.140) | coding (655/1938 nt) | slt | lytic murein transglycosylase, soluble | |||||
TAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGATTTTACCCG > minE/2977607‑2977747 | tAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCa > 1:2744331/1‑71 (MQ=255) aaCACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCaataat > 1:761843/1‑71 (MQ=255) gcgaaggtcagtaccgtattagggttgttcgccagtgaaatGATTACCAGACTATCGCCTCGGCAATCa < 1:2333219‑M1/28‑1 (MQ=255) gcgaaggtcagtaccgtattagggttgttcgccagtgaaatGATTACCAGACTATCGCCTCGGCAATCa < 1:46566‑M1/28‑1 (MQ=255) gcgaaggtcaggaccgtattagggttgttcgccagtgaaatGATTACCAGACTATCGCCTCGGCAATCa < 1:3353031‑M1/28‑1 (MQ=255) acacAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCAt < 1:1992341/70‑1 (MQ=255) cacaGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCAttt > 1:995052/1‑71 (MQ=255) cacaGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCAttt < 1:1918193/71‑1 (MQ=255) cacaGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCAttt < 1:2431738/71‑1 (MQ=255) cacaGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCAttt < 1:2541195/71‑1 (MQ=255) cacaGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCAttt < 1:1619267/71‑1 (MQ=255) aGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAc > 1:3318306/1‑71 (MQ=255) aGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAc > 1:1104446/1‑71 (MQ=255) aGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAc > 1:1166872/1‑71 (MQ=255) ggCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACt > 1:1789978/1‑71 (MQ=255) ccTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTgg > 1:500563/1‑71 (MQ=255) ccTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTgg > 1:661468/1‑71 (MQ=255) cTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGc > 1:112183/1‑71 (MQ=255) cTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGc > 1:1225903/1‑71 (MQ=255) cTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGc > 1:2585458/1‑71 (MQ=255) aCAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGaacaa < 1:374056/71‑1 (MQ=255) aCAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGaaca < 1:2490695/70‑1 (MQ=255) aGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAAcc > 1:1461233/1‑71 (MQ=255) gTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCAttt < 1:1959709/55‑1 (MQ=255) gTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAAccc > 1:3241426/1‑71 (MQ=255) tGCTGGCAGGGCAGATGCCTGCCGATTACCAGCCTATCGCCTCGGCAATCATTTCACTGGCGAACAAcc > 1:1407155/1‑69 (MQ=255) tGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAAccc > 1:3174268/1‑70 (MQ=255) tGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCt > 1:1892088/1‑71 (MQ=255) gCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCt > 1:926721/1‑70 (MQ=255) cagggcagATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACg > 1:2187651/1‑71 (MQ=255) agggcagATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACgg < 1:2191783/71‑1 (MQ=255) ggcagATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGATCAACCCTAATACGGTa < 1:824921/71‑1 (MQ=255) ggcagATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACTGTa < 1:1111947/71‑1 (MQ=255) cagATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACt > 1:2554059/1‑71 (MQ=255) cagATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACt > 1:1049555/1‑71 (MQ=255) cagATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACt > 1:1344021/1‑71 (MQ=255) cagATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACt > 1:1020472/1‑71 (MQ=255) agATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACt > 1:518997/1‑70 (MQ=255) agATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACt > 1:512697/1‑70 (MQ=255) agATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACt > 1:1375761/1‑70 (MQ=255) gcctgccGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCt > 1:2842845/1‑71 (MQ=255) gcctgccGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCt > 1:481838/1‑71 (MQ=255) gcctgccGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCt > 1:376018/1‑71 (MQ=255) gcctgccGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCt > 1:262487/1‑71 (MQ=255) ccGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTcgcg < 1:3574042/71‑1 (MQ=255) ccGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTcgcg < 1:1694126/71‑1 (MQ=255) ccGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTcgc < 1:2247119/70‑1 (MQ=255) caGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTa < 1:141789‑M1/49‑1 (MQ=255) tgattgccgaggcgatagtctggtaatcATTTCACTGGCGAACAACCCTAATACGGTCCTGACCTTcgc < 1:3353031‑M2/41‑1 (MQ=255) tgattgccgaggcgatagtctggtaatcATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTcgc < 1:2333219‑M2/41‑1 (MQ=255) tgattgccgaggcgatagtctggtaatcATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTcgc < 1:46566‑M2/41‑1 (MQ=255) cGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTcgc > 1:790904/1‑69 (MQ=255) cGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTcgc > 1:2708008/1‑69 (MQ=255) GATTACCAGACTTTCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTcgcgcg > 1:245748‑M1/1‑71 (MQ=255) GATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTcgcgcg > 1:1403083‑M1/1‑71 (MQ=255) attgccgaggcgatagtctggtaatcATTTCACTGGCGAACAACCCt < 1:2240133‑M2/21‑1 (MQ=255) attgccgaggcgatagtctggtaatcATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTcgcgc > 1:744441‑M2/27‑69 (MQ=255) attgccgaggcgatagtctggtaatcATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTcgcgc > 1:1784674‑M2/27‑69 (MQ=255) TTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTa < 1:1255225‑M1/71‑1 (MQ=255) aCCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACt > 1:2732304/1‑55 (MQ=255) aCCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACt > 1:142510/1‑55 (MQ=255) aCCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACt > 1:1526102/1‑55 (MQ=255) aCCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACt > 1:1951628/1‑55 (MQ=255) aCCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTAc < 1:2500150/70‑1 (MQ=255) aCCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTAc < 1:1757292/70‑1 (MQ=255) ccAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACaa < 1:2979296/71‑1 (MQ=255) cAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTc < 1:2151417/60‑1 (MQ=255) cAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAAc < 1:2087229/71‑1 (MQ=255) cAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAAc > 1:1795561/1‑71 (MQ=255) cAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAAc < 1:912743/71‑1 (MQ=255) gACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAAt < 1:1786105/43‑1 (MQ=255) gACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAAt < 1:3246128/43‑1 (MQ=255) gACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTg > 1:2425780/1‑71 (MQ=255) gACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTg < 1:3714210/71‑1 (MQ=255) aCTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCt < 1:3107866/39‑1 (MQ=255) aCTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCt < 1:1140372/39‑1 (MQ=255) aCTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTg < 1:2738097/70‑1 (MQ=255) tATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGgcg > 1:3394863/1‑71 (MQ=255) tATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGgcg > 1:142799/1‑71 (MQ=255) tCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGgcgc > 1:3217838/1‑70 (MQ=255) tCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGgcgc > 1:506886/1‑70 (MQ=255) tCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGgcgc > 1:2606473/1‑70 (MQ=255) cTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGa > 1:968416/1‑68 (MQ=255) cTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCg < 1:998848/71‑1 (MQ=255) tCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGgc < 1:1818482/63‑1 (MQ=255) tCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGa > 1:2196078/1‑71 (MQ=255) gcGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGgcg > 1:387203/2‑64 (MQ=255) cGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGAt > 1:2801226/1‑71 (MQ=255) ggCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTAc < 1:1912719/54‑1 (MQ=255) ggCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGa < 1:1661101/69‑1 (MQ=255) ggCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGAtt < 1:1526127/71‑1 (MQ=255) ggCAATCATTTCACTGGCGAACAACCCTAATACGGAACTGACCTTCGCGCGTACAACTgg > 1:1705267/1‑60 (MQ=255) aatcATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGATTTTa < 1:1530640‑M2/67‑1 (MQ=255) aatcATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGATTTTa < 1:3023265‑M2/67‑1 (MQ=255) tcATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCg < 1:3624969‑M2/61‑1 (MQ=255) tcATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGATTTTAcc > 1:3491781‑M2/3‑71 (MQ=255) cATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAAc < 1:1917483‑M2/50‑1 (MQ=255) aTTTCACTGGCGAACACCCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCg > 1:664763/1‑61 (MQ=255) aTTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGATTTTACCCg < 1:802695/71‑1 (MQ=255) | TAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGATTTTACCCG > minE/2977607‑2977747 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |