| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 860365 | 47 (0.800) | 3 (0.060) | 3/90 | NT | 7.2% | coding (1536/1563 nt) | trpE | component I of anthranilate synthase |
| ? | minE | = 860375 | 36 (0.690) | coding (1526/1563 nt) | trpE | component I of anthranilate synthase | |||||
GTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAGCGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTA > minE/860306‑860444 | gTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAg > 1:1218966/1‑70 (MQ=255) gATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAGcgcg > 1:1684067‑M2/1‑67 (MQ=255) tattatCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAGcgcg < 1:709795‑M2/69‑5 (MQ=255) atCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAGCTCGCAGTa < 1:530913/70‑1 (MQ=255) atCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAGCGCGCAGTa < 1:819135/70‑1 (MQ=255) atCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAGCGCGCAGTa < 1:1514636/70‑1 (MQ=255) atCAAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAGCGCGCAGTa > 1:1798363/1‑70 (MQ=255) tCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAGCGCGCAGTa < 1:1006674/69‑1 (MQ=255) gAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAGCGCGCAGTACAGCGCGGGCtt > 1:2551276/1‑71 (MQ=255) aaTGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAGCGCGCAGTACAGCGCGGGCttt > 1:2365020/1‑71 (MQ=255) gTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAGCGCGCAGTACAGCGCGGGCtt < 1:2793512/67‑1 (MQ=255) tCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAGCGCGCAGTACAGCGCGGGCTTTGTTa > 1:1643090/1‑71 (MQ=255) aGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAGCGCGCAGTACAGCGCGGGCTTTGTTACg > 1:3146281/1‑71 (MQ=255) aGCCATCAGAAAGTCTACTGTGCATGATGCGCGGTGGCAATAGCGCGCAGTACAGCGCGGGCTTTGTTAc < 1:287580/70‑1 (MQ=255) ccATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAGCGCGCAGTACAGCGCGGGCTTTGTTACggg > 1:2772096/1‑71 (MQ=255) ccATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAGCGCGCAGTACAGCGCGGGCTTTGTTACggg < 1:2097272/71‑1 (MQ=255) aTCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAGCGCGCAGTACAGCGCGGGCTTTGTTACg > 1:969131/1‑67 (MQ=255) aGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAGCGCGCAg < 1:1520535/43‑1 (MQ=255) aGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAGCGCGCAg < 1:2865425/43‑1 (MQ=255) aGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAGCGCGCAGTACAGCGCGGGCTTTGTTACGGGTTtcg < 1:528986/71‑1 (MQ=255) aGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAGCGCGCAGTACAGCGCGGGCTTTGTTACGGGTTtcg < 1:2388145/71‑1 (MQ=255) gAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAGCGCGCAGTACAGCGCGGGCTTTGTTACGGGTTtcgt < 1:2713255/71‑1 (MQ=255) aaGTCTCCTGTGCATGATGCGCGGTGGCAATAGCGCGCAGTACAGCGCGGGCTTTGTTACGGGTTtcgtc < 1:3384368/70‑1 (MQ=255) aaGTCTCCTGTGCATGATGCGCGGTGGCAATAGCGCGCAGTACAGCGCGGGCTTTGTTACGGGTTtcgt > 1:2662548/1‑69 (MQ=255) aGTCTCCTGTGCATGATGCGCGGTGGCAATAGCGCGCAGTACAGCGCGGGCTTTGTTACGGGTTtc > 1:2189245/1‑66 (MQ=255) aGTCTCCTGTGCATGATGCGCGGTGGCAATAGCGCGCAGTACAGCGCGGGCTTTGTTACGGGTTtc > 1:1839589/1‑66 (MQ=255) aGTCTCCTGTGCATGATGCGCGGTGGCAATAGCGCGCAGTACAGCGCGGGCTTTGTTACGGGTTtc > 1:3441429/1‑66 (MQ=255) tcCTGTGCATGATGCGCGGTGGCAATAGCGCGCAGTACa > 1:3357947/1‑39 (MQ=255) tcCTGTGCATGATGCGCGGTGGCAATAGCGCGCAGTACAGCGCGGGCTTTGTTa < 1:2420532/54‑1 (MQ=255) tcCTGTGCATGATGCGCGGTGGCAATAGCGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTc > 1:2542463/1‑71 (MQ=255) ccTGTGCATGATGCGCGGTGGCAATAGCGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTcc > 1:1743684/1‑71 (MQ=255) cTGTGCATGATGCGCGGTGGCAATAGCGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTcc > 1:1073654/1‑70 (MQ=255) cTGTGCATGATGCGCGGTGGCAATAGCGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTcc > 1:371326/1‑70 (MQ=255) cTGTGCATGATGCGCGGTGGCAATAGCGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTcc > 1:1931550/1‑70 (MQ=255) tgCATGATGCGCGGTGGCAATAGCGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGa < 1:732289/69‑1 (MQ=255) cATGATGCGCGGTGGCAATAGCGCGCAGTACAGCGCGGGCTTTg > 1:3584204/1‑44 (MQ=255) cATGATGCGCGGTGGCAATAGCGCGCAGTACAGCGCGGGCTTTg > 1:921962/1‑44 (MQ=255) tgatgCGCGGTGGCAATAGCGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCgg < 1:3661440/71‑1 (MQ=255) tgatgCGCGGTGGCAATAGCGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCgg < 1:1301347/71‑1 (MQ=255) atgCGCGGTGGCAATAGcgcgcatcatgcacaggagactttctgatggctgacattctgctgctcgataa < 1:3047524‑M2/70‑54 (MQ=255) atgCGCGGTGGCAATAGCGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGaa < 1:400864/71‑1 (MQ=255) tgCGCGGTGGCAATAGcgcgcatcatgcacaggagactttctgatggctgacattctgctgctcgat > 1:2698378‑M2/1‑16 (MQ=255) tgCGCGGTGGCAATAGCGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGaa > 1:1754488/1‑70 (MQ=255) tgCGCGGTGGCAATAGCGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAAc < 1:60072/71‑1 (MQ=255) cgcgGTGGCAATAGcgcgcatcatgcacaggagactttctgatggctgacattctgctgctcgataata < 1:2532661‑M2/69‑56 (MQ=255) cgcgGTGGCAATAGCGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACa < 1:1711485/70‑1 (MQ=255) cgcgGTGGCAATAGCGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACa < 1:1280720/70‑1 (MQ=255) gTGGCAATAGCGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATc < 1:3194419/71‑1 (MQ=255) ggCAATAGCGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATc > 1:2513111/1‑69 (MQ=255) gCAATAGCGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCaa < 1:2369192/70‑1 (MQ=255) aaTAGCGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGa > 1:1218308/1‑71 (MQ=255) tAGCGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGAc > 1:1387660/1‑70 (MQ=255) aGCGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTa > 1:2004388/1‑71 (MQ=255) | GTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAGCGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTA > minE/860306‑860444 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |