| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2281412 = | 33 (0.560) | 9 (0.170) | 4/94 | NT | 21.6% | intergenic (‑92/‑185) | fabR/sthA | DNA‑binding transcriptional repressor/pyridine nucleotide transhydrogenase, soluble |
| ? | minE | 2281464 = | 35 (0.640) | intergenic (‑144/‑133) | fabR/sthA | DNA‑binding transcriptional repressor/pyridine nucleotide transhydrogenase, soluble | |||||
TTACGTACAGCGGAAACCTGCCGCTTAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACAGACAAAGCAAAGGCCGCTCAGGATATAGCCAGATAAATGACGGGGATCAATTGGC > minE/2281396‑2281534 | ttACGTACAGCGGAAACCTGCCGCTTAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACGTCAGGGc < 1:2062697/70‑1 (MQ=255) cGGAAACCTGCCGCTTAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGa > 1:637944/1‑70 (MQ=255) aaaCCTGCCGCTTAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACa < 1:2934843/71‑1 (MQ=255) aaCCTGCCGCTTAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGaaa > 1:688826/1‑68 (MQ=255) aaCCTGCCGCTTAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGaaa > 1:1684063/1‑68 (MQ=255) aCCTGCCGCTTAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACAGa < 1:3129867/71‑1 (MQ=255) CCTGCCGCTTAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACAGa < 1:1015438‑M1/70‑1 (MQ=255) CTGCCGCTTAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACAGAc < 1:890789‑M1/70‑1 (MQ=255) CTGCCGCTTAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACAGAc < 1:1911719‑M1/70‑1 (MQ=255) GCCGCTTAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACAGACa < 1:2784200‑M1/69‑1 (MQ=255) GCCGCTTAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACAGACa < 1:338702‑M1/69‑1 (MQ=255) ccGCTTAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACAGAcaaag < 1:1740262/71‑1 (MQ=255) cgttttattggatttttatcgacgatactctccgtttaagcggcaggGCAAAAGTAAGAAACAGAcaaag > 1:42459‑M2/48‑70 (MQ=255) cgttttattggatttttatcgacgatactctccgtttaagcggcaggGCAAAAGTAAGAAACAGAcaaag > 1:2249588‑M2/48‑70 (MQ=255) cgttttattggatttttatcgacgatactctccgtttaagcggcaggGCAAAAGTAAGAAACAGAcaaag > 1:2550332‑M2/48‑70 (MQ=255) cGCTTAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACAGAcaaagc < 1:3544616/71‑1 (MQ=255) cGCTTAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACAGAcaaagc < 1:2217345/71‑1 (MQ=255) cGCTTAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACAGAca < 1:2541605/67‑1 (MQ=255) cGCTTAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACAGAca < 1:2732849/67‑1 (MQ=255) gCTTAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACAGAcaaagca < 1:1874252/71‑1 (MQ=255) gCTTAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACAGAcaaagc < 1:2678598/70‑1 (MQ=255) cTTAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACAGAcaaagcaa < 1:385132/71‑1 (MQ=255) cTTAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACAGAcaaagcaa < 1:2779174/71‑1 (MQ=255) ttAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACAGAcaaagca > 1:439329/1‑69 (MQ=255) aaCGGAGAGTATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACAGAcaaagcaaa < 1:1697612/68‑1 (MQ=255) aaCGGAGAGTATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACAGAcaaagcaaa < 1:663685/68‑1 (MQ=255) ttggatttttatcgacgatactctccgtttaagcggcaggGCAAAAGTAAGAAACAGACAAATCAAAGGc < 1:2712713‑M2/30‑1 (MQ=255) gatttttatcgacgatactctccgtttaagcggcaggGCAAAAGTAAGAAACAGACAAAGCAAAGGCCGc < 1:2685292‑M2/33‑1 (MQ=255) gatttttatcgacgatactctccgtttaagcggcaggGCAAAAGTAAGAAACAGACAAAGCAAAGGCCGc < 1:2340282‑M2/33‑1 (MQ=255) agagTATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACAGACAAAGCAAAgg > 1:3149994/1‑65 (MQ=255) agagTATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACAGACAAAGCAAAgg > 1:3612967/1‑65 (MQ=255) gagTATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACAGACAAAGCAAAGGCCGCTCa < 1:639840/71‑1 (MQ=255) gagTATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACAGACAAAGCAAAGGCCGCTCa < 1:1845164/71‑1 (MQ=255) tATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACAGACAAAGCAAAGGCCGCTCAGGa > 1:1698165/1‑71 (MQ=255) tATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACAGACAAAGCAAAGGCCGCTCAGGa > 1:1693783/1‑71 (MQ=255) tcgtcgATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACAGAcaa < 1:1986009/51‑1 (MQ=255) tcgtcgATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACAGACAAAGCAAAGGCCGCTCAGGata < 1:3561081/71‑1 (MQ=255) tcgtcgATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACAGACAAAGCAAAGGCCGCTCAGGat < 1:3619928/70‑1 (MQ=255) gtcgATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACAGAcaaagca < 1:75492/53‑1 (MQ=255) tcgATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACAGACAAAGCAAAGGCCGCTAAGGATATAg > 1:539872/1‑71 (MQ=255) gATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACAGACAAAGCAAAGGCCGCt > 1:1745690/1‑59 (MQ=255) aaaaaTCCAATAAAACGTCAGGGCAAAAGTAAGAAACAGACAAAGCAAAGGCCg > 1:1129373/1‑54 (MQ=255) actctccgtttaagcggcaggGCAAAAGTAAGaaa > 1:18499‑M2/22‑35 (MQ=255) actctccgtttaagcggcaggGCAAAAGTAAGaaa > 1:3636353‑M2/22‑35 (MQ=255) actctccgtttaagcggcaggGCAAAAGTAAGaaa > 1:269323‑M2/22‑35 (MQ=255) cAATAAAACGTCAGGGCAAAAGTAAGAAACAGACAAAGCAAAGGCCGCTCAGGATATAGCCAGATAAATGa > 1:2767147/1‑71 (MQ=255) aaTAAAACGTCAGGGCAAAAGTAAGAAACAGACAAAGCAAAGGCCGCTCAGGATATAGCCAGATAAATGAc < 1:1155748/71‑1 (MQ=255) tAAAACGTCAGGGCAAAAGTAAGAAACAGACAAAGCAAAGGCCGCTCAGGATATAGCCAGATAAATGACgg > 1:1340124/1‑71 (MQ=255) aaaCGTCAGGGCAAAAGTAAGAAACAGACAAAGCAAAGGCCGCTCAGGATATAGCCAGATAAATGACgggg < 1:832961/71‑1 (MQ=255) aaaCGTCAGGGCAAAAGTAAGAAACAGACAAAGCAAAGGCCGCTCAGGATATAGCCAGATAAATGACgggg < 1:3691628/71‑1 (MQ=255) aaCGTCAGGGCAAAAGTAAGAAACAGAcaaagcaaa < 1:558775/36‑1 (MQ=255) cGTCAGGGCAAAAGTAAGAAACAGACAAAGCAAAgg > 1:3459945/1‑36 (MQ=255) cGTCAGGGCAAAAGTAAGAAACAGACAAAGCAAAgg > 1:2248945/1‑36 (MQ=255) cGTCAGGGCAAAAGTAAGAAACAGACAAAGCAAAgg > 1:3078341/1‑36 (MQ=255) cGTCAGGGCAAAAGTAAGAAACAGACAAAGCAAAgg > 1:3247853/1‑36 (MQ=255) cGTCAGGGCAAAAGTAAGAAACAGACAAAGCAAAgg > 1:3260236/1‑36 (MQ=255) cGTCAGGGCAAAAGTAAGAAACAGACAAAGCAAAgg > 1:3717865/1‑36 (MQ=255) gTCAGGGCAAAAGTAAGAAACAGACAAAGCAAAGGCCGCTCAGGATATAg < 1:159399/50‑1 (MQ=255) gTCAGGGCAAAAGTAAGAAACAGACAAAGCAAAGGCCGCTCAGGATATAGCCAGATAAATGACGGGGATCa < 1:3171843/71‑1 (MQ=255) tCAGGGCAAAAGTAAGAAACAGACAAAGCAAAGGCCGCTCAGGATATAGCCAGATAAATGACGGGGATCaa > 1:3408208/1‑71 (MQ=255) acaggGCAAAAGTAAGAAACAGACAAAGCAAAGGCCGCTCAGGATATAGCCAGATAAATGACGGGGATCa > 1:2244626‑M2/6‑70 (MQ=255) gCAAAAGTAAGAAACAGACAAAGCAAAGGCCGCTCAGGATATAGCCAGATAAATGACGGGGATCAATTGGc > 1:346833/1‑71 (MQ=255) | TTACGTACAGCGGAAACCTGCCGCTTAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACAGACAAAGCAAAGGCCGCTCAGGATATAGCCAGATAAATGACGGGGATCAATTGGC > minE/2281396‑2281534 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |