| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2577253 = | 110 (1.860) | 6 (0.110) | 3/94 | NT | 5.8% | coding (846/1650 nt) | treF | cytoplasmic trehalase |
| ? | minE | 2577286 = | 95 (1.750) | coding (813/1650 nt) | treF | cytoplasmic trehalase | |||||
Only 100 of 129 total aligned reads displayed.
TCGTCACGCGGCGTGTCGCGATCGTCCCAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGTCCATCCAGAAGGCATATTCCATTTTAAGGT > minE/2577218‑2577356 | tCGTCACGCGGCGTGTCGCGATCGTCCCAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATg > 1:1345150/1‑71 (MQ=255) agaatcgttaatccctaatcaggcctatcgccatGTTGAGCAGCGAACCGTCCGGCATCCGCACAACAt > 1:1248587‑M1/35‑69 (MQ=255) gTCACGCGGCGTGTCGCGATCGTCCCAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGc > 1:899258/1‑71 (MQ=255) gTCACGCGGCGTGTCGCGATCGTCCCAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGc > 1:3614014/1‑71 (MQ=255) gTCACGCGGCGTGTCGCGATCGTCCCAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGc > 1:3727593/1‑71 (MQ=255) gTCACGCGGCGTGTCGCGATCGTCCCAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGc > 1:2912961/1‑71 (MQ=255) aatcgttaatccctaatcaggcctatcgccatGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATgg < 1:100349‑M1/37‑1 (MQ=255) cACGCGGCGTGTCGCGATCGTCCCAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGa > 1:938232/1‑71 (MQ=255) aCGCGGCGTGTCGCGATCGTCCCAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGAt < 1:3274802/71‑1 (MQ=255) gcggcgTGTCGCGATCGTCCCAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGATAg < 1:2888694/71‑1 (MQ=255) ggcgTGTCGCGATCGTCCCAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGATAGGc > 1:790166/1‑71 (MQ=255) ggcgTGTCGCGATCGTCCCAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGATAGGc > 1:839400/1‑71 (MQ=255) ggcgTGTCGCGATCGTCCCAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGATAGGc > 1:1416844/1‑71 (MQ=255) gcgTGTCGCGATCGTCCCAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGc < 1:2541254/63‑1 (MQ=255) gcgTGTCGCGATCGTCCCAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGc < 1:3210705/63‑1 (MQ=255) cgTGTCGCGATCGTCCCAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGa > 1:2279280/1‑64 (MQ=255) tgtCGCGATCGTCCCAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGa < 1:3460383/71‑1 (MQ=255) cgcgATCGTCCCAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGAt > 1:2659646/1‑69 (MQ=255) gcgATCGTCCCAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATgg > 1:3162371/1‑55 (MQ=255) gcgATCGTCCCAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTa < 1:3349636/70‑1 (MQ=255) cgATCGTCCCAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAgg < 1:2853255/71‑1 (MQ=255) gATCGTCCCAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTg < 1:1574771/64‑1 (MQ=255) gATCGTCCCAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTg < 1:2556095/64‑1 (MQ=255) gATCGTCCCAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTg < 1:1163118/64‑1 (MQ=255) gATCGTCCCAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTg < 1:1943063/64‑1 (MQ=255) aTCGTCCCAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTg < 1:2427381/63‑1 (MQ=255) tCGTCCCAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGAt < 1:2007187/71‑1 (MQ=255) cGTCCCAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATg > 1:63008/1‑49 (MQ=255) gTCCCAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGAtt < 1:2868733/70‑1 (MQ=255) gTCCCAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGAtt < 1:423485/70‑1 (MQ=255) cccAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAAc > 1:2288456/1‑71 (MQ=255) ccAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGAtt < 1:1828055/67‑1 (MQ=255) ccAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGAtt < 1:2980319/67‑1 (MQ=255) ccAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAAc < 1:1783503/70‑1 (MQ=255) ccAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAAc < 1:613566/70‑1 (MQ=255) ccAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAAc < 1:1043687/70‑1 (MQ=255) cAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGa < 1:1507688/71‑1 (MQ=255) cAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGa > 1:858957/1‑71 (MQ=255) aGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGAt > 1:2228671/1‑71 (MQ=255) aGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGAt > 1:1803712/1‑71 (MQ=255) aGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGAt > 1:1452511/1‑71 (MQ=255) ccatgttgtgcggatgccggacggatcgctgctcaacATGGCGATAGGCCTGATTAGGGATTAACGAtt < 1:100349‑M2/32‑1 (MQ=255) atgttgtgcggatgccggacggttcgctgctcaacATGGCGATAGGCCTGATTAGGGATTAACGATTCt > 1:1248587‑M2/36‑69 (MQ=255) ggTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCa < 1:402885/71‑1 (MQ=255) ggTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCa > 1:737008/1‑71 (MQ=255) ggTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCa > 1:807681/1‑71 (MQ=255) TTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGAt > 1:2452967‑M1/1‑40 (MQ=255) TTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAgg > 1:453267‑M1/1‑53 (MQ=255) TTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAgg > 1:1103682‑M1/1‑53 (MQ=255) gtgcggatgccggacggatcgctgctcaacATGGCGATa < 1:1778724‑M2/9‑1 (MQ=255) gtgcggatgccggacggatcgctgctcaacATGGCGATa < 1:1303232‑M2/9‑1 (MQ=255) tgcggatgccggacggatcgctgctcaacATGGCGATa < 1:1529023‑M2/9‑1 (MQ=255) gcagcGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTg < 1:2008331/63‑1 (MQ=255) gcagcGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTg < 1:2479228/63‑1 (MQ=255) gcagcGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGtc > 1:3269306/1‑70 (MQ=255) gcagcGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGtc > 1:2768548/1‑70 (MQ=255) cagcGATCCGTCCGGCATCCGCGCAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGtcca < 1:3010131/71‑1 (MQ=255) cagcGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTg < 1:3081670/62‑1 (MQ=255) agcGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTTATTAGGGATTAACGATTCTGCACCGtccat < 1:1073817/71‑1 (MQ=255) agcGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCa > 1:2737143/1‑63 (MQ=255) agcGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGtccat < 1:173161/71‑1 (MQ=255) agcGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGtccat < 1:271316/71‑1 (MQ=255) gcGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGtccatc > 1:1395904/1‑71 (MQ=255) gcGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGtccatc > 1:2057919/1‑71 (MQ=255) ctaTCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGtccatc > 1:200640/3‑70 (MQ=255) cGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGAt < 1:1393628/55‑1 (MQ=255) cGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGAt < 1:3670406/55‑1 (MQ=255) cGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGtccatc > 1:2629325/1‑70 (MQ=255) aTCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGtcc > 1:408229/1‑65 (MQ=255) aTCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGTCCATCCAg < 1:1031327/71‑1 (MQ=255) ccgtccgGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGTCCATCCAg > 1:2463750/1‑69 (MQ=255) cgtccgGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGTCCATCCAGAAg < 1:205350/71‑1 (MQ=255) tccgGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTa > 1:1910837/1‑43 (MQ=255) tccgGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTa > 1:1386421/1‑43 (MQ=255) tccgGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTa > 1:3514575/1‑43 (MQ=255) tccgGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGAtt < 1:387530/49‑1 (MQ=255) ccgGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCAcc > 1:1726927/1‑55 (MQ=255) ccgGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGTCCATCCAGAAGGCa > 1:1106292/1‑71 (MQ=255) cgGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCt > 1:2116243/1‑49 (MQ=255) ggCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCAcc < 1:3531429/53‑1 (MQ=255) ggCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCAcc < 1:3518181/53‑1 (MQ=255) ggCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGTCCATCCAGAAGGc > 1:290741/1‑68 (MQ=255) ggCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGTCCATCCAGAAGGCata < 1:305054/71‑1 (MQ=255) ggCAACCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGTCCATCCAGAAGGCa > 1:958896/1‑69 (MQ=255) gCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGAt > 1:1262158/1‑44 (MQ=255) gCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGAt > 1:3200306/1‑44 (MQ=255) aTCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGTCCATCCAGAAGGCATATTc > 1:991797/1‑71 (MQ=255) tCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGTCCATCCAGAAGGCATATTcc < 1:696790/71‑1 (MQ=255) tCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGTCCATCCAGAAGGCATATTcc < 1:2121767/71‑1 (MQ=255) cGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGTCCATCCAg > 1:1846920/1‑57 (MQ=255) cGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGTCCATCCAGAAGGCATATTCCa < 1:1851397/70‑1 (MQ=255) cGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGTCCATCCAGAAGGCATATTCCa < 1:1973989/70‑1 (MQ=255) acaacaTGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGTCTATCCAGAAGGCATATTCCAtttt < 1:2401168/71‑1 (MQ=255) acaacaTGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGTCCATCCAGAAGGCATATTCCAtttt < 1:1660201/71‑1 (MQ=255) aacATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGtccat > 1:371018‑M2/4‑48 (MQ=255) aacATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGtccat > 1:3584671‑M2/4‑48 (MQ=255) aacATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGtccat > 1:3363242‑M2/4‑48 (MQ=255) aacATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGtccat > 1:1970223‑M2/4‑48 (MQ=255) aacATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGTCCATCCAGAAGGCATATTCCAtttt > 1:754071‑M2/4‑69 (MQ=255) aTGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGTCCATCCAGAAGGCATATTCCATTTTAAggt < 1:1678611/71‑1 (MQ=255) | TCGTCACGCGGCGTGTCGCGATCGTCCCAGTAACGGTTGAGCAGCGATCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGTCCATCCAGAAGGCATATTCCATTTTAAGGT > minE/2577218‑2577356 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |