| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2889932 = | 99 (1.680) | 7 (0.130) | 3/96 | NT | 8.3% | coding (287/639 nt) | msrA | methionine sulfoxide reductase A |
| ? | minE | 2889960 = | 62 (1.120) | coding (259/639 nt) | msrA | methionine sulfoxide reductase A | |||||
GCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGC > minE/2889891‑2890025 | gCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGca > 1:2598946/1‑70 (MQ=255) cTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGca < 1:2646929/69‑1 (MQ=255) tCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGcaca > 1:3278911/1‑70 (MQ=255) tCATAGCTGAAGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCacac > 1:624406/1‑71 (MQ=255) aTAGCTTATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACtt > 1:8455/1‑71 (MQ=255) tAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTc < 1:1324882/71‑1 (MQ=255) aGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTcc > 1:1959463/1‑71 (MQ=255) aGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTcc > 1:1569054/1‑71 (MQ=255) gCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTccc < 1:2178524/71‑1 (MQ=255) tgatgaCGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGa > 1:44938/1‑71 (MQ=255) atgaCGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGAt > 1:605584/1‑70 (MQ=255) atgaCGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATa < 1:1424250/71‑1 (MQ=255) atgaCGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATa < 1:1150426/71‑1 (MQ=255) tgaCGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATaa < 1:146915/71‑1 (MQ=255) aaGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGAt < 1:2766709/63‑1 (MQ=255) aaGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGa > 1:2169232/1‑71 (MQ=255) gATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGAttt < 1:409087/71‑1 (MQ=255) gATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGAttt < 1:2487403/71‑1 (MQ=255) gATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGAtt < 1:2857994/70‑1 (MQ=255) gATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGAtt < 1:3231392/70‑1 (MQ=255) aTCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAg < 1:1218572/62‑1 (MQ=255) tCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTgg < 1:3667922/71‑1 (MQ=255) gTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTccc > 1:1967495/1‑53 (MQ=255) gTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTccc > 1:2301304/1‑53 (MQ=255) gTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTc < 1:1874695/51‑1 (MQ=255) gTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTc < 1:2050707/51‑1 (MQ=255) gTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTc < 1:3578057/51‑1 (MQ=255) gTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTc < 1:3410896/51‑1 (MQ=255) gTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGc < 1:3195808/70‑1 (MQ=255) gTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGc < 1:983821/70‑1 (MQ=255) gTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGc < 1:3333233/70‑1 (MQ=255) gTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGc < 1:1708784/70‑1 (MQ=255) tAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGt < 1:1018101/71‑1 (MQ=255) aaaCAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGca > 1:2866342/1‑43 (MQ=255) aaaCAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGca > 1:1219297/1‑43 (MQ=255) aaaCAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGca > 1:589208/1‑43 (MQ=255) aaaCAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGca > 1:2549658/1‑43 (MQ=255) aaaCAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCacac > 1:489945/1‑46 (MQ=255) aaaCAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTccc > 1:252114/1‑51 (MQ=255) aaCAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGta > 1:3168392/1‑70 (MQ=255) cAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAg < 1:1680744/71‑1 (MQ=255) cAAAGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAg < 1:1380708/71‑1 (MQ=255) tGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAgccg < 1:2296807/71‑1 (MQ=255) gTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGa < 1:2602351/44‑1 (MQ=255) gTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGa < 1:3243251/44‑1 (MQ=255) tACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGt > 1:162288/1‑48 (MQ=255) aCCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCgg > 1:3199003/1‑70 (MQ=255) aCCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCgg > 1:3031129/1‑70 (MQ=255) ccGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGta < 1:2743934/71‑1 (MQ=255) cGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGAttt > 1:708173/1‑52 (MQ=255) cGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGAttt > 1:707388/1‑52 (MQ=255) gctccggtgattcgggtcatgccgaagcACACTTCCCGATAAGTCGGAttt < 1:398979‑M2/23‑1 (MQ=255) gctccggtgatacgggtcatgccgaagcACACTTCCCGATAAGTCGGAttt < 1:310488‑M2/23‑1 (MQ=255) gctccggtgatacgggtcatgccgaagcACACTTCCCGATAAGTCGGAttt < 1:663221‑M2/23‑1 (MQ=255) GCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCg > 1:611856‑M1/1‑46 (MQ=255) GCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGtata > 1:735956‑M1/1‑71 (MQ=255) CTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGtata > 1:3197352‑M1/1‑58 (MQ=255) CTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGtata > 1:321044‑M1/1‑58 (MQ=255) CTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGtata > 1:54840‑M1/1‑58 (MQ=255) tccggtgatacgggtcatgccgaagcACACTTCCCGATAAGTCGGATTTgg > 1:1624787‑M2/27‑51 (MQ=255) tccggtgatacgggtcatgccgaagcACACTTCCCGATAAGTCGGATTTgg > 1:674986‑M2/27‑51 (MQ=255) tacGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGtata < 1:1598223/55‑1 (MQ=255) TTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGtata > 1:3674458‑M1/1‑57 (MQ=255) TTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGtata > 1:488890‑M1/1‑57 (MQ=255) TTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGc < 1:2181904‑M1/71‑1 (MQ=255) tCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAgc > 1:472025/1‑58 (MQ=255) cggtgatacgggtcatgccgaagcACACTTCCCGATAAGTCGGATTTgg > 1:1164547‑M2/25‑49 (MQ=255) cATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCg < 1:3697774/48‑1 (MQ=255) cATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCg < 1:1525248/48‑1 (MQ=255) aTGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGAt > 1:2629079/1‑41 (MQ=255) aTGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGAt > 1:2488229/1‑41 (MQ=255) aTGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGAt > 1:2463622/1‑41 (MQ=255) aTGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGAt > 1:2059190/1‑41 (MQ=255) aTGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGAt > 1:537943/1‑41 (MQ=255) aTGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGtata > 1:101814/1‑51 (MQ=255) aTGAACCGTATCACCGGAGCACACTTCCCGATAAGTCGGAt > 1:1076131/1‑41 (MQ=255) aCCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTgcggcg < 1:2112353/70‑1 (MQ=255) cccGTATCACCGGAGCACACTTCCCGATAAGTCGGAtt > 1:2379006/1‑38 (MQ=255) ccGTATCACCGGAGCACACTTCCCGATAAGTCGGAtt < 1:2588405/37‑1 (MQ=255) gtcatgccgaagcACACTTCCCGATAAGTCGGAttt < 1:512515‑M2/23‑1 (MQ=255) gTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCg < 1:1428123/40‑1 (MQ=255) gTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCg < 1:284108/40‑1 (MQ=255) gTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCg < 1:2640365/40‑1 (MQ=255) gTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCg < 1:3577042/40‑1 (MQ=255) gTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCt > 1:2068359/1‑71 (MQ=255) tCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCg < 1:784832/37‑1 (MQ=255) cgaagcACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACg < 1:517714‑M2/65‑1 (MQ=255) ggAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGc < 1:2141553/71‑1 (MQ=255) | GCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGC > minE/2889891‑2890025 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |