Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2390563	2390573	11	7 [0]	[0] 39	rhtC	threonine efflux system

AAACCTTTCAGGAAACTGCGCCCACTTTTCGCCAGCTCGACCTGTGGCGCAGGTGCAGAAAC  >  minE/2390501‑2390562                                                              | aaaCCTTTCAGGAAACTGCGCCCACTTTTCGCCAGCTCGACCTGTGGCGCAGGTGCAGAAAc  <  1:1107351/62‑1 (MQ=255) aaaCCTTTCAGGAAACTGCGCCCACTTTTCGCCAGCTCGACCTGTGGCGCAGGTGCAGAAAc  <  1:1136669/62‑1 (MQ=255) aaaCCTTTCAGGAAACTGCGCCCACTTTTCGCCAGCTCGACCTGTGGCGCAGGTGCAGAAAc  <  1:1239635/62‑1 (MQ=255) aaaCCTTTCAGGAAACTGCGCCCACTTTTCGCCAGCTCGACCTGTGGCGCAGGTGCAGAAAc  <  1:2760214/62‑1 (MQ=255) aaaCCTTTCAGGAAACTGCGCCCACTTTTCGCCAGCTCGACCTGTGGCGCAGGTGCAGAAAc  <  1:2977636/62‑1 (MQ=255) aaaCCTTTCAGGAAACTGCGCCCACTTTTCGCCAGCTCGACCTGTGGCGCAGGTGCAGAAAc  <  1:3372300/62‑1 (MQ=255)  aaCCTTTCAGGAAACTGCGCCCACTTTTCGCCAGCTCGACCTGTGGCGCAGGTGCAGAAAc  <  1:521921/61‑1 (MQ=255)                                                              | AAACCTTTCAGGAAACTGCGCCCACTTTTCGCCAGCTCGACCTGTGGCGCAGGTGCAGAAAC  >  minE/2390501‑2390562

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑