Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2661904	2661939	36	39 [0]	[1] 79	rtcR	sigma 54‑dependent transcriptional regulator of rtcBA expression

GCAGCATTGCCTGTTCGTCTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATAAA  >  minE/2661922‑2662001                   |                                                              gcagcaTTGCCTGTTCGTCTGCGCCCAGTTCGCCAATCTAATCAAGAAACAACATTccgccg                    >  1:1580432/1‑62 (MQ=255)                   cTGCGCCCAGTTCTCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:1449514/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGTCGCTGCGTAATaaa  <  1:962641/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTTCGTAATaaa  <  1:3039414/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:271566/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:3188374/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:3119056/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:3077078/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:3036406/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:296614/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:2846794/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:2739174/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:2174062/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:2681885/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:2657179/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:2641001/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:2617360/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:2371968/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:235263/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:2335497/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:2193755/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:2142486/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:693522/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:991502/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:902386/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:886145/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:872909/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:864313/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:728860/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:721283/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:707695/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:3287450/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:580060/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:488218/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:384758/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:3624483/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:3583133/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:3544567/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:3405598/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:3290853/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:1303271/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:1502920/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:1487118/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:1477380/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:146550/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:1434294/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:1385712/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:1384865/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:1345214/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:1343826/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:1669162/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:127727/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:1237308/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:1229912/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:1225771/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:1208932/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:1140411/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:1080785/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:1060675/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:1932178/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:1021504/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:2142146/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:2093819/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:2072068/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:2063143/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:2044265/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:2016359/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:2006893/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:1992493/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:2152622/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:192463/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:1886066/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:1875363/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:1840680/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:1840338/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:1795293/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:1745972/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATaaa  <  1:1729323/62‑1 (MQ=255)                   cTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCATTGGCGCTGCGTAATaaa  <  1:3418845/62‑1 (MQ=255)                   |                                                              GCAGCATTGCCTGTTCGTCTGCGCCCAGTTCGCCAATCTCATCAAGAAACAACATTCCGCCGTTGGCGCTGCGTAATAAA  >  minE/2661922‑2662001

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑