Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	397155	397253	99	41 [0]	[0] 33	lipA	lipoate synthase

CACGATCCATACGACCGCGGAAATCCGGCACCAGAGTTTCAATTTTGATTTGCGGGCTTTTT  >  minE/397254‑397315 |                                                              cACGATCCATACGACCGCGGAAATCCGGCACCAGAGTTTCAATTTTGa                >  1:2134492/1‑48 (MQ=255) cACGATCCATACGACCGCGGAAATCCGGCACCAGAGTTTCAATTTTGATTTGCGGGCttttt  >  1:2533140/1‑62 (MQ=255) cACGATCCATACGACCGCGGAAATCCGGCACCAGAGTTTCAATTTTGATTTGCGGGCttttt  >  1:978810/1‑62 (MQ=255) cACGATCCATACGACCGCGGAAATCCGGCACCAGAGTTTCAATTTTGATTTGCGGGCttttt  >  1:946046/1‑62 (MQ=255) cACGATCCATACGACCGCGGAAATCCGGCACCAGAGTTTCAATTTTGATTTGCGGGCttttt  >  1:913601/1‑62 (MQ=255) cACGATCCATACGACCGCGGAAATCCGGCACCAGAGTTTCAATTTTGATTTGCGGGCttttt  >  1:800144/1‑62 (MQ=255) cACGATCCATACGACCGCGGAAATCCGGCACCAGAGTTTCAATTTTGATTTGCGGGCttttt  >  1:606401/1‑62 (MQ=255) cACGATCCATACGACCGCGGAAATCCGGCACCAGAGTTTCAATTTTGATTTGCGGGCttttt  >  1:468765/1‑62 (MQ=255) cACGATCCATACGACCGCGGAAATCCGGCACCAGAGTTTCAATTTTGATTTGCGGGCttttt  >  1:466249/1‑62 (MQ=255) cACGATCCATACGACCGCGGAAATCCGGCACCAGAGTTTCAATTTTGATTTGCGGGCttttt  >  1:389017/1‑62 (MQ=255) cACGATCCATACGACCGCGGAAATCCGGCACCAGAGTTTCAATTTTGATTTGCGGGCttttt  >  1:3498603/1‑62 (MQ=255) cACGATCCATACGACCGCGGAAATCCGGCACCAGAGTTTCAATTTTGATTTGCGGGCttttt  >  1:3214727/1‑62 (MQ=255) cACGATCCATACGACCGCGGAAATCCGGCACCAGAGTTTCAATTTTGATTTGCGGGCttttt  >  1:3071681/1‑62 (MQ=255) cACGATCCATACGACCGCGGAAATCCGGCACCAGAGTTTCAATTTTGATTTGCGGGCttttt  >  1:3065902/1‑62 (MQ=255) cACGATCCATACGACCGCGGAAATCCGGCACCAGAGTTTCAATTTTGATTTGCGGGCttttt  >  1:2938471/1‑62 (MQ=255) cACGATCCATACGACCGCGGAAATCCGGCACCAGAGTTTCAATTTTGATTTGCGGGCttttt  >  1:2605353/1‑62 (MQ=255) cACGATCCATACGACCGCGGAAATCCGGCACCAGAGTTTCAATTTTGATTTGCGGGCttttt  >  1:1684287/1‑62 (MQ=255) cACGATCCATACGACCGCGGAAATCCGGCACCAGAGTTTCAATTTTGATTTGCGGGCttttt  >  1:1309250/1‑62 (MQ=255) cACGATCCATACGACCGCGGAAATCCGGCACCAGAGTTTCAATTTTGATTTGCGGGCttttt  >  1:1395142/1‑62 (MQ=255) cACGATCCATACGACCGCGGAAATCCGGCACCAGAGTTTCAATTTTGATTTGCGGGCttttt  >  1:1407821/1‑62 (MQ=255) cACGATCCATACGACCGCGGAAATCCGGCACCAGAGTTTCAATTTTGATTTGCGGGCttttt  >  1:142458/1‑62 (MQ=255) cACGATCCATACGACCGCGGAAATCCGGCACCAGAGTTTCAATTTTGATTTGCGGGCttttt  >  1:1597276/1‑62 (MQ=255) cACGATCCATACGACCGCGGAAATCCGGCACCAGAGTTTCAATTTTGATTTGCGGGCttttt  >  1:1605213/1‑62 (MQ=255) cACGATCCATACGACCGCGGAAATCCGGCACCAGAGTTTCAATTTTGATTTGCGGGCttttt  >  1:128477/1‑62 (MQ=255) cACGATCCATACGACCGCGGAAATCCGGCACCAGAGTTTCAATTTTGATTTGCGGGCttttt  >  1:1709884/1‑62 (MQ=255) cACGATCCATACGACCGCGGAAATCCGGCACCAGAGTTTCAATTTTGATTTGCGGGCttttt  >  1:1722824/1‑62 (MQ=255) cACGATCCATACGACCGCGGAAATCCGGCACCAGAGTTTCAATTTTGATTTGCGGGCttttt  >  1:2058027/1‑62 (MQ=255) cACGATCCATACGACCGCGGAAATCCGGCACCAGAGTTTCAATTTTGATTTGCGGGCttttt  >  1:2097393/1‑62 (MQ=255) cACGATCCATACGACCGCGGAAATCCGGCACCAGAGTTTCAATTTTGATTTGCGGGCttttt  >  1:2279407/1‑62 (MQ=255) cACGATCCATACGACCGCGGAAATCCGGCACCAGAGTTTCAATTTTGATTTGCGGGCttttt  >  1:2438204/1‑62 (MQ=255) cACGATCCATACGACCGCGGAAATCCGGCACCAGAGTGTCAATTTTGATTTGCGGGCttttt  >  1:1390248/1‑62 (MQ=255) cACGATCCATACGACCGCGGAAATACGGCACCAGAGTTTCAATTTTGATTTGCGGGCttttt  >  1:456545/1‑62 (MQ=255) cACGATCCATACGACCGCGGAAATACGGCACCAGAGTTTCAATTTTGATTTGCGGGCttttt  >  1:2667292/1‑62 (MQ=255) |                                                              CACGATCCATACGACCGCGGAAATCCGGCACCAGAGTTTCAATTTTGATTTGCGGGCTTTTT  >  minE/397254‑397315

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑