Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2496143	2496144	2	45 [0]	[0] 5	emrD	multidrug efflux system protein

TGTGAGACACCGTAAGTCAGCAGATAAGCGCCCATTACGCTCTGCACCGC  >  minE/2496145‑2496194 |                                                  tgtgAGACACCGTAAGTCAGCAGATAAGCGCCCATTACGCTCTGCACCGc  >  1:1003380/1‑50 (MQ=255) tgtgAGACACCGTAAGTCAGCAGATAAGCGCCCATTACGCTCTGCACCGc  >  1:1047208/1‑50 (MQ=255) tgtgAGACACCGTAAGTCAGCAGATAAGCGCCCATTACGCTCTGCACCGc  >  1:275360/1‑50 (MQ=255) tgtgAGACACCGTAAGTCAGCAGATAAGCGCCCATTACGCTCTGCACCGc  >  1:643841/1‑50 (MQ=255) tgtgAGACACCGTAAGTCAGCAGATAAGCGCCCATTACGCTCTGCACCGc  >  1:78442/1‑50 (MQ=255) |                                                  TGTGAGACACCGTAAGTCAGCAGATAAGCGCCCATTACGCTCTGCACCGC  >  minE/2496145‑2496194

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑