Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2544374	2544438	65	8 [0]	[0] 16	rfaL	O‑antigen ligase

AAGGTTTTTTATATTATAATTTTCTTGTCTGCCACGTAAAATTAGTGACAATAAGCAAACTA  >  minE/2544312‑2544373                                                              | aaGGTTTTTTATATTATAATTTTCTTGTCTGCCACGTAAAATTAGTGACAATAAGCAAACta  <  1:1148358/62‑1 (MQ=255) aaGGTTTTTTATATTATAATTTTCTTGTCTGCCACGTAAAATTAGTGACAATAAGCAAACta  <  1:1379855/62‑1 (MQ=255) aaGGTTTTTTATATTATAATTTTCTTGTCTGCCACGTAAAATTAGTGACAATAAGCAAACta  <  1:1532632/62‑1 (MQ=255) aaGGTTTTTTATATTATAATTTTCTTGTCTGCCACGTAAAATTAGTGACAATAAGCAAACta  <  1:2365373/62‑1 (MQ=255) aaGGTTTTTTATATTATAATTTTCTTGTCTGCCACGTAAAATTAGTGACAATAAGCAAACta  <  1:3040745/62‑1 (MQ=255) aaGGTTTTTTATATTATAATTTTCTTGTCTGCCACGTAAAATTAGTGACAATAAGCAAACta  <  1:3137972/62‑1 (MQ=255) aaGGTTTTTTATATTATAATTTTCTTGTCTGCCACGTAAAATTAGTGACAATAAGCAAACta  <  1:364867/62‑1 (MQ=255)  aGGTTTTTTATATTATAATTTTCTTGTCTGCCACGTAAAATTAGTTACAATAAGCAAACta  <  1:2592899/61‑1 (MQ=255)                                                              | AAGGTTTTTTATATTATAATTTTCTTGTCTGCCACGTAAAATTAGTGACAATAAGCAAACTA  >  minE/2544312‑2544373

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑