Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1123247	1123298	52	16 [0]	[0] 40	[pheT]	[pheT]

TTGCTAAGCCCAAGCTTATCAAACAGATATTCTGACATTTCAGCTTTTGTAAGCGCCATAGG  >  minE/1123185‑1123246                                                              | ttGCTAAGCCCCAGCTTATCAAACAGATATTCTGACATTTCAGCTTTTGTAAGCGCCATAgg  >  1:2409568/1‑62 (MQ=255) ttGCTAAGCCCAAGCTTATCAAACAGATATTCTGACATTTCAGCTTTTGTAAGCGCCATAgg  >  1:105819/1‑62 (MQ=255) ttGCTAAGCCCAAGCTTATCAAACAGATATTCTGACATTTCAGCTTTTGTAAGCGCCATAgg  >  1:1715/1‑62 (MQ=255) ttGCTAAGCCCAAGCTTATCAAACAGATATTCTGACATTTCAGCTTTTGTAAGCGCCATAgg  >  1:1782779/1‑62 (MQ=255) ttGCTAAGCCCAAGCTTATCAAACAGATATTCTGACATTTCAGCTTTTGTAAGCGCCATAgg  >  1:1813621/1‑62 (MQ=255) ttGCTAAGCCCAAGCTTATCAAACAGATATTCTGACATTTCAGCTTTTGTAAGCGCCATAgg  >  1:1891086/1‑62 (MQ=255) ttGCTAAGCCCAAGCTTATCAAACAGATATTCTGACATTTCAGCTTTTGTAAGCGCCATAgg  >  1:1895103/1‑62 (MQ=255) ttGCTAAGCCCAAGCTTATCAAACAGATATTCTGACATTTCAGCTTTTGTAAGCGCCATAgg  >  1:1955368/1‑62 (MQ=255) ttGCTAAGCCCAAGCTTATCAAACAGATATTCTGACATTTCAGCTTTTGTAAGCGCCATAgg  >  1:2109964/1‑62 (MQ=255) ttGCTAAGCCCAAGCTTATCAAACAGATATTCTGACATTTCAGCTTTTGTAAGCGCCATAgg  >  1:2439531/1‑62 (MQ=255) ttGCTAAGCCCAAGCTTATCAAACAGATATTCTGACATTTCAGCTTTTGTAAGCGCCATAgg  >  1:2537351/1‑62 (MQ=255) ttGCTAAGCCCAAGCTTATCAAACAGATATTCTGACATTTCAGCTTTTGTAAGCGCCATAgg  >  1:2737209/1‑62 (MQ=255) ttGCTAAGCCCAAGCTTATCAAACAGATATTCTGACATTTCAGCTTTTGTAAGCGCCATAgg  >  1:3027812/1‑62 (MQ=255) ttGCTAAGCCCAAGCTTATCAAACAGATATTCTGACATTTCAGCTTTTGTAAGCGCCATAgg  >  1:343245/1‑62 (MQ=255) ttGCTAAGCCCAAGCTTATCAAACAGATATTCTGACATTTCAGCTTTTGTAAGCGCCATAgg  >  1:816271/1‑62 (MQ=255) ttGCTAAGCCCAAGCTTATCAAACAGATATTCTGACATTTCAGCTTTTGTAAGCGCCATAgg  >  1:944702/1‑62 (MQ=255)                                                              | TTGCTAAGCCCAAGCTTATCAAACAGATATTCTGACATTTCAGCTTTTGTAAGCGCCATAGG  >  minE/1123185‑1123246

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑