Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1742488	1742649	162	23 [0]	[0] 34	rpoE	RNA polymerase, sigma 24 (sigma E) factor

CGCCCCTGAGCAACCAGGTAATTTTTCGCTGTATTTACAGCAATCCGATACAGCCATGTAT  >  minE/1742427‑1742487                                                             | cgCCCCTGAGCAACCAGGTAATTTTTCGCTGTATTTACAGCAATCCGATACAGCCATGtat  >  1:2820942/1‑61 (MQ=255) cgCCCCTGAGCAACCAGGTAATTTTTCGCTGTATTTACAGCAATCCGATACAGCCATGtat  >  1:805711/1‑61 (MQ=255) cgCCCCTGAGCAACCAGGTAATTTTTCGCTGTATTTACAGCAATCCGATACAGCCATGtat  >  1:78900/1‑61 (MQ=255) cgCCCCTGAGCAACCAGGTAATTTTTCGCTGTATTTACAGCAATCCGATACAGCCATGtat  >  1:695733/1‑61 (MQ=255) cgCCCCTGAGCAACCAGGTAATTTTTCGCTGTATTTACAGCAATCCGATACAGCCATGtat  >  1:653232/1‑61 (MQ=255) cgCCCCTGAGCAACCAGGTAATTTTTCGCTGTATTTACAGCAATCCGATACAGCCATGtat  >  1:607701/1‑61 (MQ=255) cgCCCCTGAGCAACCAGGTAATTTTTCGCTGTATTTACAGCAATCCGATACAGCCATGtat  >  1:414788/1‑61 (MQ=255) cgCCCCTGAGCAACCAGGTAATTTTTCGCTGTATTTACAGCAATCCGATACAGCCATGtat  >  1:3148634/1‑61 (MQ=255) cgCCCCTGAGCAACCAGGTAATTTTTCGCTGTATTTACAGCAATCCGATACAGCCATGtat  >  1:3126843/1‑61 (MQ=255) cgCCCCTGAGCAACCAGGTAATTTTTCGCTGTATTTACAGCAATCCGATACAGCCATGtat  >  1:3015474/1‑61 (MQ=255) cgCCCCTGAGCAACCAGGTAATTTTTCGCTGTATTTACAGCAATCCGATACAGCCATGtat  >  1:2869154/1‑61 (MQ=255) cgCCCCTGAGCAACCAGGTAATTTTTCGCTGTATTTACAGCAATCCGATACAGCCATGtat  >  1:284661/1‑61 (MQ=255) cgCCCCTGAGCAACCAGGTAATTTTTCGCTGTATTTACAGCAATCCGATACAGCCATGtat  >  1:1032762/1‑61 (MQ=255) cgCCCCTGAGCAACCAGGTAATTTTTCGCTGTATTTACAGCAATCCGATACAGCCATGtat  >  1:2449742/1‑61 (MQ=255) cgCCCCTGAGCAACCAGGTAATTTTTCGCTGTATTTACAGCAATCCGATACAGCCATGtat  >  1:2372534/1‑61 (MQ=255) cgCCCCTGAGCAACCAGGTAATTTTTCGCTGTATTTACAGCAATCCGATACAGCCATGtat  >  1:2103243/1‑61 (MQ=255) cgCCCCTGAGCAACCAGGTAATTTTTCGCTGTATTTACAGCAATCCGATACAGCCATGtat  >  1:2067152/1‑61 (MQ=255) cgCCCCTGAGCAACCAGGTAATTTTTCGCTGTATTTACAGCAATCCGATACAGCCATGtat  >  1:1888055/1‑61 (MQ=255) cgCCCCTGAGCAACCAGGTAATTTTTCGCTGTATTTACAGCAATCCGATACAGCCATGtat  >  1:154424/1‑61 (MQ=255) cgCCCCTGAGCAACCAGGTAATTTTTCGCTGTATTTACAGCAATCCGATACAGCCATGtat  >  1:1508679/1‑61 (MQ=255) cgCCCCTGAGCAACCAGGTAATTTTTCGCTGTATTTACAGCAATCCGATACAGCCATGtat  >  1:1504755/1‑61 (MQ=255) cgCCCCTGAGCAACCAGGTAATTTTTCGCTGTATTTACAGCAATCCGATACAGCCATGtat  >  1:135174/1‑61 (MQ=255) cgCCCCTGAGCAACCAGGTAATTTTTCGCTGTATTTACAGCAATCCGATACAGCCATGtat  >  1:1042802/1‑61 (MQ=255)                                                             | CGCCCCTGAGCAACCAGGTAATTTTTCGCTGTATTTACAGCAATCCGATACAGCCATGTAT  >  minE/1742427‑1742487

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑