Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1226538	1226548	11	8 [0]	[0] 24	pphA	serine/threonine‑specific protein phosphatase 1

TCTGTTGATTATCTGCCAGCGCAATAAACCAGTCGCCGCCATTCATCAACCACAAAGACAT  >  minE/1226549‑1226609 |                                                             tCTGTTGTTTATCTGCCAGCGCAATAAACCAGTCGCCGCCATTCATCAACCACAAAGACAt  <  1:592078/61‑1 (MQ=255) tCTGTTGATTATCTGCCAGCGCAATAAACCAGTCGCCGCCATTCATCAACCACAAAGACAt  <  1:2766485/61‑1 (MQ=255) tCTGTTGATTATCTGCCAGCGCAATAAACCAGTCGCCGCCATTCATCAACCACAAAGACAt  <  1:904506/61‑1 (MQ=255) tCTGTTGATTATCTGCCAGCGCAATAAACCAGTCGCCGCCATTCATCAACCACAAAGACAt  <  1:859654/61‑1 (MQ=255) tCTGTTGATTATCTGCCAGCGCAATAAACCAGTCGCCGCCATTCATCAACCACAAAGACAt  <  1:826845/61‑1 (MQ=255) tCTGTTGATTATCTGCCAGCGCAATAAACCAGTCGCCGCCATTCATCAACCACAAAGACAt  <  1:698630/61‑1 (MQ=255) tCTGTTGATTATCTGCCAGCGCAATAAACCAGTCGCCGCCATTCATCAACCACAAAGACAt  <  1:578960/61‑1 (MQ=255) tCTGTTGATTATCTGCCAGCGCAATAAACCAGTCGCCGCCATTCATCAACCACAAAGACAt  <  1:56556/61‑1 (MQ=255) tCTGTTGATTATCTGCCAGCGCAATAAACCAGTCGCCGCCATTCATCAACCACAAAGACAt  <  1:454839/61‑1 (MQ=255) tCTGTTGATTATCTGCCAGCGCAATAAACCAGTCGCCGCCATTCATCAACCACAAAGACAt  <  1:414847/61‑1 (MQ=255) tCTGTTGATTATCTGCCAGCGCAATAAACCAGTCGCCGCCATTCATCAACCACAAAGACAt  <  1:3295298/61‑1 (MQ=255) tCTGTTGATTATCTGCCAGCGCAATAAACCAGTCGCCGCCATTCATCAACCACAAAGACAt  <  1:3186290/61‑1 (MQ=255) tCTGTTGATTATCTGCCAGCGCAATAAACCAGTCGCCGCCATTCATCAACCACAAAGACAt  <  1:1144086/61‑1 (MQ=255) tCTGTTGATTATCTGCCAGCGCAATAAACCAGTCGCCGCCATTCATCAACCACAAAGACAt  <  1:2428246/61‑1 (MQ=255) tCTGTTGATTATCTGCCAGCGCAATAAACCAGTCGCCGCCATTCATCAACCACAAAGACAt  <  1:2095728/61‑1 (MQ=255) tCTGTTGATTATCTGCCAGCGCAATAAACCAGTCGCCGCCATTCATCAACCACAAAGACAt  <  1:1994246/61‑1 (MQ=255) tCTGTTGATTATCTGCCAGCGCAATAAACCAGTCGCCGCCATTCATCAACCACAAAGACAt  <  1:1932980/61‑1 (MQ=255) tCTGTTGATTATCTGCCAGCGCAATAAACCAGTCGCCGCCATTCATCAACCACAAAGACAt  <  1:184733/61‑1 (MQ=255) tCTGTTGATTATCTGCCAGCGCAATAAACCAGTCGCCGCCATTCATCAACCACAAAGACAt  <  1:1783931/61‑1 (MQ=255) tCTGTTGATTATCTGCCAGCGCAATAAACCAGTCGCCGCCATTCATCAACCACAAAGACAt  <  1:162408/61‑1 (MQ=255) tCTGTTGATTATCTGCCAGCGCAATAAACCAGTCGCCGCCATTCATCAACCACAAAGACAt  <  1:1419972/61‑1 (MQ=255) tCTGTTGATTATCTGCCAGCGCAATAAACCAGTCGCCGCCATTCATCAACCACAAAGACAt  <  1:1346574/61‑1 (MQ=255) tCTGTTGATTATCTGCCAGCGCAATAAACCAGTCGCCGCCATTCATCAACCACAAAGACAt  <  1:13402/61‑1 (MQ=255) tCTGTTGATTATCTGCCAGCGCAATAAACCAGTCGCCGCCATTCATCAACCACAAAGACAt  <  1:130678/61‑1 (MQ=255) |                                                             TCTGTTGATTATCTGCCAGCGCAATAAACCAGTCGCCGCCATTCATCAACCACAAAGACAT  >  minE/1226549‑1226609

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑