Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1443347	1443385	39	78 [0]	[0] 34	rcsD	phosphotransfer intermediate protein in two‑component regulatory system with RcsBC

ATTGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATG  >  minE/1443386‑1443446 |                                                             attGAGGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATg  >  1:2768309/1‑61 (MQ=255) attGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCg              >  1:1276333/1‑49 (MQ=255) attGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAAt   >  1:925540/1‑60 (MQ=255) attGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATg  >  1:300786/1‑61 (MQ=255) attGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATg  >  1:981596/1‑61 (MQ=255) attGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATg  >  1:3059525/1‑61 (MQ=255) attGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATg  >  1:322746/1‑61 (MQ=255) attGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATg  >  1:3261012/1‑61 (MQ=255) attGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATg  >  1:3265882/1‑61 (MQ=255) attGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATg  >  1:329265/1‑61 (MQ=255) attGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATg  >  1:381154/1‑61 (MQ=255) attGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATg  >  1:475258/1‑61 (MQ=255) attGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATg  >  1:642514/1‑61 (MQ=255) attGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATg  >  1:693034/1‑61 (MQ=255) attGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATg  >  1:722686/1‑61 (MQ=255) attGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATg  >  1:873163/1‑61 (MQ=255) attGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATg  >  1:89297/1‑61 (MQ=255) attGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATg  >  1:1254087/1‑61 (MQ=255) attGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATg  >  1:2982689/1‑61 (MQ=255) attGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATg  >  1:2765277/1‑61 (MQ=255) attGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATg  >  1:2596518/1‑61 (MQ=255) attGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATg  >  1:2592812/1‑61 (MQ=255) attGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATg  >  1:2515133/1‑61 (MQ=255) attGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATg  >  1:2436868/1‑61 (MQ=255) attGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATg  >  1:2416059/1‑61 (MQ=255) attGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATg  >  1:2384301/1‑61 (MQ=255) attGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATg  >  1:2303853/1‑61 (MQ=255) attGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATg  >  1:2225711/1‑61 (MQ=255) attGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATg  >  1:2122901/1‑61 (MQ=255) attGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATg  >  1:2040381/1‑61 (MQ=255) attGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATg  >  1:191358/1‑61 (MQ=255) attGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATg  >  1:1830154/1‑61 (MQ=255) attGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATg  >  1:1756912/1‑61 (MQ=255) attGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATAGCCTCTGGGCGGAGATGAAAATg  >  1:3130032/1‑61 (MQ=255) |                                                             ATTGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATG  >  minE/1443386‑1443446

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑