| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1611756 | 10 (0.170) | 25 (0.430) +A |
9/118 | 2.1 | 43.1% | coding (1397/1404 nt) | eutA | reactivating factor for ethanolamine ammonia lyase |
| ? | minE | 2083040 = | 57 (0.950) | coding (66/663 nt) | yqjA | conserved inner membrane protein | |||||
CTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1611693‑1611756‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCGATGATTGGCATGTTGTA > minE/2083040‑2083060 | CTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGAT > 1:135576/1‑71CTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGAT > 1:25175/1‑71 TTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGAT > 1:289821/1‑70 TAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATG > 1:83521/1‑70 AACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGAT < 1:1701145/70‑1 TATACATTGCCGAACAATGTGGTCTTTAGTTTCATATGTCGTTCCCTCAGGAAGAATCGATGATTGGCATt < 1:1838187/71‑2 CATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTt < 1:980592/70‑2 TTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTt < 1:238182/68‑2 TGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTtca > 1:430227/1‑66 AACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTt > 1:1141140/1‑61 AACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTt > 1:482139/1‑61 TTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCAT > 1:1509546/1‑45 TTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTT < 1:245091/44‑1 TTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTT < 1:2864244/44‑1 TTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTT < 1:747724/44‑1 TTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCA < 1:2392033/40‑1 TTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCA < 1:373837/40‑1 TTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCA < 1:1784375/40‑1 TAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCAT > 1:199927/1‑36 TAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCAT > 1:2569634/1‑36 TAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCAT > 1:2573120/1‑36 TAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCAT > 1:1973902/1‑36 TAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCAT > 1:1795604/1‑36 TAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCAT > 1:661073/1‑36 TAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCAT > 1:1103767/1‑36 | CTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1611693‑1611756‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCGATGATTGGCATGTTGTA > minE/2083040‑2083060 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |