New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	minE	= 1611756	10 (0.170)	25 (0.430) +A	9/118	2.1	43.1%	coding (1397/1404 nt)	eutA	reactivating factor for ethanolamine ammonia lyase
	?	minE	2083040 =	57 (0.950)					coding (66/663 nt)	yqjA	conserved inner membrane protein

CTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATAT  >  minE/1611693‑1611825                                                                |                                                                      cTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgat                                                                >  1:135576‑M1/1‑64 (MQ=255) cTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgat                                                                >  1:25175‑M1/1‑64 (MQ=255)  ttAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgat                                                                >  1:289821‑M1/1‑63 (MQ=255)   tAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatg                                                               >  1:83521‑M1/1‑62 (MQ=255)     aaCTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgat                                                             <  1:1701145‑M1/70‑11 (MQ=255)           tataCATTGCCGAACAATGTGGTCTTTAGTTTCATATGTCGTTCCCTCAGGAAGaatcgatgattggcatt                                                      <  1:1838187‑M1/71‑18 (MQ=255)               cATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcattttt                                                   <  1:980592‑M1/70‑21 (MQ=255)                 ttGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcattttt                                                   <  1:238182‑M1/68‑21 (MQ=255)                  tGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcatttttca                                                 >  1:430227‑M1/1‑47 (MQ=255)                       aaCAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCaggaag                                                                       >  1:2312431/1‑42 (MQ=255)                       aaCAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcattttt                                                   >  1:1141140‑M1/1‑42 (MQ=255)                       aaCAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcattttt                                                   >  1:482139‑M1/1‑42 (MQ=255)                                    ttAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcat                                                       >  1:1509546‑M1/1‑29 (MQ=255)                                        tttCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcatttt                                                    <  1:747724‑M1/44‑20 (MQ=255)                                        tttCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcatttt                                                    <  1:2864244‑M1/44‑20 (MQ=255)                                        tttCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcatttt                                                    <  1:245091‑M1/44‑20 (MQ=255)                                        tttCATAAGTCGTTCCCTCAGGAAGaatcgatgattggca                                                        <  1:1784375‑M1/40‑16 (MQ=255)                                        tttCATAAGTCGTTCCCTCAGGAAGaatcgatgattggca                                                        <  1:373837‑M1/40‑16 (MQ=255)                                        tttCATAAGTCGTTCCCTCAGGAAGaatcgatgattggca                                                        <  1:2392033‑M1/40‑16 (MQ=255)                                             tAAGTCGTTCCCTCAGGAAGaatcgatgattggcat                                                       >  1:1795604‑M1/1‑20 (MQ=255)                                             tAAGTCGTTCCCTCAGGAAGaatcgatgattggcat                                                       >  1:661073‑M1/1‑20 (MQ=255)                                             tAAGTCGTTCCCTCAGGAAGaatcgatgattggcat                                                       >  1:2573120‑M1/1‑20 (MQ=255)                                             tAAGTCGTTCCCTCAGGAAGaatcgatgattggcat                                                       >  1:2569634‑M1/1‑20 (MQ=255)                                             tAAGTCGTTCCCTCAGGAAGaatcgatgattggcat                                                       >  1:1103767‑M1/1‑20 (MQ=255)                                             tAAGTCGTTCCCTCAGGAAGaatcgatgattggcat                                                       >  1:199927‑M1/1‑20 (MQ=255)                                             tAAGTCGTTCCCTCAGGAAGaatcgatgattggcat                                                       >  1:1973902‑M1/1‑20 (MQ=255)                                                        ttCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATg         >  1:307987/2‑71 (MQ=255)                                                         tCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCa                           <  1:1413078/52‑1 (MQ=255)                                                          cAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGt        <  1:3005855/70‑1 (MQ=255)                                                          cAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGt        <  1:2338840/70‑1 (MQ=255)                                                          cAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGt        <  1:2311752/70‑1 (MQ=255)                                                          cAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGt        <  1:2090174/70‑1 (MQ=255)                                                           aggaaggaAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAagag                    >  1:1253997/1‑57 (MQ=255)                                                           aggaaggaAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCg      <  1:2154960/71‑1 (MQ=255)                                                           aggaaggaAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGCCg      <  1:1367730/71‑1 (MQ=255)                                                               aggaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGatat  <  1:2543146/71‑1 (MQ=255)                                                                |                                                                      CTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATAT  >  minE/1611693‑1611825

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.