Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1317796	1317951	156	22 [0]	[0] 14	cld	regulator of length of O‑antigen component of lipopolysaccharide chains

CCTGATTCGCATACTGCAACGCTTCCTGAATCTGACGGATACGCAGATCTTTCTGCTCCTGC  >  minE/1317952‑1318013 |                                                              ccTGATTCTCATACTGCAACGCTTCCTGAATCTGACGGATACGCAGATCTTTCTGCTCCTgc  <  1:101087/62‑1 (MQ=255) ccTGATTCGCATACTGCAACGCTTCCTGAATCTGACGGATTCGCAGATCTTTCTGCTCCTgc  <  1:529701/62‑1 (MQ=255) ccTGATTCGCATACTGCAACGCTTCCTGAATCTGACGGATACGCAGATCTTTCTGCTCCTgc  <  1:1025130/62‑1 (MQ=255) ccTGATTCGCATACTGCAACGCTTCCTGAATCTGACGGATACGCAGATCTTTCTGCTCCTgc  <  1:201454/62‑1 (MQ=255) ccTGATTCGCATACTGCAACGCTTCCTGAATCTGACGGATACGCAGATCTTTCTGCTCCTgc  <  1:22738/62‑1 (MQ=255) ccTGATTCGCATACTGCAACGCTTCCTGAATCTGACGGATACGCAGATCTTTCTGCTCCTgc  <  1:234034/62‑1 (MQ=255) ccTGATTCGCATACTGCAACGCTTCCTGAATCTGACGGATACGCAGATCTTTCTGCTCCTgc  <  1:518404/62‑1 (MQ=255) ccTGATTCGCATACTGCAACGCTTCCTGAATCTGACGGATACGCAGATCTTTCTGCTCCTgc  <  1:565835/62‑1 (MQ=255) ccTGATTCGCATACTGCAACGCTTCCTGAATCTGACGGATACGCAGATCTTTCTGCTCCTgc  <  1:603502/62‑1 (MQ=255) ccTGATTCGCATACTGCAACGCTTCCTGAATCTGACGGATACGCAGATCTTTCTGCTCCTgc  <  1:73040/62‑1 (MQ=255) ccTGATTCGCATACTGCAACGCTTCCTGAATCTGACGGATACGCAGATCTTTCTGCTCCTgc  <  1:796798/62‑1 (MQ=255) ccTGATTCGCATACTGCAACGCTTCCTGAATCTGACGGATACGCAGATCTTTCTGCTCCTgc  <  1:863835/62‑1 (MQ=255) ccTGATTCGCATACTGCAACGCTTCCTGAATCTGACGGATACGCAGATCTTTCTGCTCCTgc  <  1:880840/62‑1 (MQ=255) ccTGATTCGCATACTGCAACGCTTCCTGAATCTGACGGATACGCAGATCCTTCTGCTCCTgc  <  1:552983/62‑1 (MQ=255) |                                                              CCTGATTCGCATACTGCAACGCTTCCTGAATCTGACGGATACGCAGATCTTTCTGCTCCTGC  >  minE/1317952‑1318013

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑