Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1980530	1980658	129	46 [0]	[0] 27	yqgF	predicted Holliday junction resolvase

GAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAGC  >  minE/1980659‑1980720 |                                                              gAAATCATCGTCGGTTTGCCGCTGAATATGTACGGCACCGAGCAACCATTGACTGCCAGAgc  <  1:981191/62‑1 (MQ=255) gAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAgc  <  1:54578/62‑1 (MQ=255) gAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAgc  <  1:948245/62‑1 (MQ=255) gAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAgc  <  1:929544/62‑1 (MQ=255) gAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAgc  <  1:871325/62‑1 (MQ=255) gAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAgc  <  1:84610/62‑1 (MQ=255) gAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAgc  <  1:781949/62‑1 (MQ=255) gAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAgc  <  1:747542/62‑1 (MQ=255) gAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAgc  <  1:733998/62‑1 (MQ=255) gAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAgc  <  1:706461/62‑1 (MQ=255) gAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAgc  <  1:629336/62‑1 (MQ=255) gAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAgc  <  1:603203/62‑1 (MQ=255) gAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAgc  <  1:583714/62‑1 (MQ=255) gAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAgc  <  1:533418/62‑1 (MQ=255) gAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAgc  <  1:507130/62‑1 (MQ=255) gAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAgc  <  1:50089/62‑1 (MQ=255) gAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAgc  <  1:492920/62‑1 (MQ=255) gAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAgc  <  1:436253/62‑1 (MQ=255) gAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAgc  <  1:4025/62‑1 (MQ=255) gAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAgc  <  1:365358/62‑1 (MQ=255) gAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAgc  <  1:240144/62‑1 (MQ=255) gAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAgc  <  1:23842/62‑1 (MQ=255) gAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAgc  <  1:178938/62‑1 (MQ=255) gAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAgc  <  1:171716/62‑1 (MQ=255) gAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAgc  <  1:1030938/62‑1 (MQ=255) gAAATCATCGTCGGATTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAgc  <  1:1024244/62‑1 (MQ=255) gAAATCATCGTCGGATTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAgc  <  1:837222/62‑1 (MQ=255) |                                                              GAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAGC  >  minE/1980659‑1980720

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑