| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 7063 | 105 (0.990) | 26 (0.270) +GATT |
7/90 | NT | 32.7% | coding (897/1431 nt) | yaaJ | predicted transporter |
| ? | minE | = 1611756 | 12 (0.110) | coding (1397/1404 nt) | eutA | reactivating factor for ethanolamine ammonia lyase | |||||
ATAAAAATGCCAATCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/7046‑7063‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGGATGT < minE/1611756‑1611688 |||| tgAAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAAT > 1:2356114/3‑71tgAAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAAT > 1:6171653/3‑71tgAAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCA < 1:1012441/67‑1tgAAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCA < 1:2828941/55‑1tgAAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCA < 1:3255730/55‑1tgAAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCA < 1:6468727/55‑1tgAAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACT < 1:6561955/38‑1tgAAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACT < 1:1859583/38‑1tgAAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACT < 1:6409869/38‑1tgAAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACT < 1:612171/38‑1tgAAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACT < 1:4559502/38‑1tgAAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACT < 1:114752/38‑1 gAAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATG > 1:1727978/2‑71 gAAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGA < 1:4088988/43‑1 AAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAA > 1:3216366/1‑45 AAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAA > 1:298539/1‑45 AAAAATGCCAATCATCGATTCTTCCTGAGGGAACGA > 1:2565894/1‑36 AAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTA > 1:3659293/1‑71 AAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATG < 1:6601200/69‑1 AAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTA > 1:6135575/1‑70 AAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAA > 1:766601/1‑43 AAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAA > 1:1520584/1‑43 AATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATA > 1:5292697/1‑71 AATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTA < 1:2956254/39‑1 ATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTT > 1:6251080/1‑70 ATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCA > 1:136036/1‑67 TCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTA < 1:1136218/71‑1 TCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTA < 1:1439779/71‑1 CATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTA < 1:6509702/70‑1 CATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTT > 1:686583/1‑69 CATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTT > 1:5132143/1‑69 CATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTT > 1:3999653/1‑69 CATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACA > 1:5889933/1‑45 CATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACA > 1:5973185/1‑45 CATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACA > 1:4675639/1‑45 CATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACA > 1:154233/1‑45 CATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACA > 1:2451663/1‑45 CATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACA > 1:5703727/1‑45 CATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACA > 1:2759428/1‑45 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAG > 1:2862551/1‑71 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAG > 1:1762310/1‑71 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAG > 1:6955941/1‑71 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAG > 1:3413759/1‑71 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAG > 1:6223928/1‑71 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTT > 1:5735201/1‑68 TCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGG < 1:645697/71‑1 TCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGG < 1:5229060/71‑1 TCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGG < 1:4315772/71‑1 TCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAA < 1:4793355/69‑1 TCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAA < 1:3475692/69‑1 TCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAA < 1:6923307/69‑1 TCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAA < 1:170773/69‑1 CGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGGA > 1:3951535/1‑71 CGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGC < 1:5346447/51‑1 CGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGC < 1:5338965/51‑1 CGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGC < 1:4467948/51‑1 CGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGC < 1:2722100/51‑1 CGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGC < 1:2153908/51‑1 GATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATG > 1:6698681/1‑54 ATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAA > 1:4425937/1‑51 ATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAA > 1:5576453/1‑51 ATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAA > 1:4928611/1‑51 ATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAA > 1:2646240/1‑51 ATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAA > 1:2340329/1‑51 ATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAA > 1:177902/1‑51 ATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAA > 1:1044964/1‑51 TCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGGATG > 1:6290109/1‑69 TCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACA > 1:6041176/1‑38 TCTTCCTGAGGGAACGACTTATGAAACTAAAGACAACATTGTTCGGCAATGTATATCAGTTTAAGGATGT > 1:5312827/1‑70 |||| ATAAAAATGCCAATCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/7046‑7063‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGGATGT < minE/1611756‑1611688 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |