| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 7063 | 105 (0.990) | 26 (0.270) +GATT |
7/90 | NT | 32.7% | coding (897/1431 nt) | yaaJ | predicted transporter |
| ? | minE | = 1611756 | 12 (0.110) | coding (1397/1404 nt) | eutA | reactivating factor for ethanolamine ammonia lyase | |||||
ACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATA > minE/1611688‑1611824 | aCATCCTTAAACTGATATACATTGCCGAACAATGTTGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGa > 1:5312827‑M2/1‑69 (MQ=255) cATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGa > 1:6290109‑M2/1‑68 (MQ=255) tCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcg > 1:3951535‑M2/1‑66 (MQ=255) ccTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcga < 1:4315772‑M2/71‑7 (MQ=255) ccTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcga < 1:5229060‑M2/71‑7 (MQ=255) ccTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcga < 1:645697‑M2/71‑7 (MQ=255) cTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgat > 1:6955941‑M2/1‑64 (MQ=255) cTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgat > 1:3413759‑M2/1‑64 (MQ=255) cTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgat > 1:2862551‑M2/1‑64 (MQ=255) cTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgat > 1:6223928‑M2/1‑64 (MQ=255) cTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgat > 1:1762310‑M2/1‑64 (MQ=255) ttAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcga < 1:170773‑M2/69‑7 (MQ=255) ttAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcga < 1:3475692‑M2/69‑7 (MQ=255) ttAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcga < 1:6923307‑M2/69‑7 (MQ=255) ttAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcga < 1:4793355‑M2/69‑7 (MQ=255) tAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatga < 1:1439779‑M2/71‑10 (MQ=255) tAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatga < 1:1136218‑M2/71‑10 (MQ=255) tAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatg < 1:6509702‑M2/70‑9 (MQ=255) aaaCTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatg > 1:3999653‑M2/1‑61 (MQ=255) aaaCTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatg > 1:686583‑M2/1‑61 (MQ=255) aaaCTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatg > 1:5132143‑M2/1‑61 (MQ=255) aaaCTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgat > 1:5735201‑M2/1‑61 (MQ=255) aaCTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgat > 1:6251080‑M2/1‑60 (MQ=255) tGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgat > 1:136036‑M2/1‑57 (MQ=255) tataCATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcatt > 1:5292697‑M2/1‑54 (MQ=255) taCATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcatttt > 1:3659293‑M2/1‑52 (MQ=255) taCATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcattt > 1:6135575‑M2/1‑52 (MQ=255) cATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcatttttc > 1:1727978‑M2/1‑50 (MQ=255) cATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcatttt < 1:6601200‑M2/69‑20 (MQ=255) cATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatc > 1:6698681‑M2/1‑50 (MQ=255) aTTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcatttttca > 1:2356114‑M2/1‑49 (MQ=255) aTTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcatttttca > 1:6171653‑M2/1‑49 (MQ=255) ttGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaat > 1:4928611‑M2/1‑48 (MQ=255) ttGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaat > 1:4425937‑M2/1‑48 (MQ=255) ttGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaat > 1:5576453‑M2/1‑48 (MQ=255) ttGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaat > 1:1044964‑M2/1‑48 (MQ=255) ttGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaat > 1:2340329‑M2/1‑48 (MQ=255) ttGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaat > 1:2646240‑M2/1‑48 (MQ=255) ttGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaat > 1:177902‑M2/1‑48 (MQ=255) tGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcatttttca < 1:1012441‑M2/69‑23 (MQ=255) gCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcg < 1:2722100‑M2/51‑6 (MQ=255) gCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcg < 1:2153908‑M2/51‑6 (MQ=255) gCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcg < 1:4467948‑M2/51‑6 (MQ=255) gCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcg < 1:5346447‑M2/51‑6 (MQ=255) gCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcg < 1:5338965‑M2/51‑6 (MQ=255) tgtgGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatg > 1:154233‑M2/1‑37 (MQ=255) tgtgGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatg > 1:4675639‑M2/1‑37 (MQ=255) tgtgGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatg > 1:2759428‑M2/1‑37 (MQ=255) tgtgGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatg > 1:5973185‑M2/1‑37 (MQ=255) tgtgGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatg > 1:5889933‑M2/1‑37 (MQ=255) tgtgGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatg > 1:5703727‑M2/1‑37 (MQ=255) tgtgGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatg > 1:2451663‑M2/1‑37 (MQ=255) tgtgGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGa > 1:6041176‑M2/1‑37 (MQ=255) tgGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcatttttca < 1:2828941‑M2/57‑23 (MQ=255) tgGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcatttttca < 1:6468727‑M2/57‑23 (MQ=255) tgGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcatttttca < 1:3255730‑M2/57‑23 (MQ=255) tAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgatt < 1:2956254‑M2/39‑12 (MQ=255) tttCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcattttt > 1:298539‑M2/1‑25 (MQ=255) tttCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcattttt > 1:3216366‑M2/1‑25 (MQ=255) tttCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcattt > 1:766601‑M2/1‑25 (MQ=255) tttCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcattt > 1:1520584‑M2/1‑25 (MQ=255) tCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcatttttc < 1:4088988‑M2/44‑22 (MQ=255) aGTCGTTCCCTCAGGAAGaatcgatgattggcatttttca < 1:6561955‑M2/40‑23 (MQ=255) aGTCGTTCCCTCAGGAAGaatcgatgattggcatttttca < 1:6409869‑M2/40‑23 (MQ=255) aGTCGTTCCCTCAGGAAGaatcgatgattggcatttttca < 1:612171‑M2/40‑23 (MQ=255) aGTCGTTCCCTCAGGAAGaatcgatgattggcatttttca < 1:4559502‑M2/40‑23 (MQ=255) aGTCGTTCCCTCAGGAAGaatcgatgattggcatttttca < 1:114752‑M2/40‑23 (MQ=255) aGTCGTTCCCTCAGGAAGaatcgatgattggcatttttca < 1:1859583‑M2/40‑23 (MQ=255) tCGTTCCCTCAGGAAGaatcgatgattggcattttt > 1:2565894‑M2/1‑16 (MQ=255) cattCAGGAAGGAAATGCGAGTGATTTCACCGTGACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCaa > 1:3331377/4‑71 (MQ=255) cattCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCa < 1:5951780/67‑1 (MQ=255) cAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAaga > 1:3142820/1‑57 (MQ=255) cAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAaga > 1:490354/1‑57 (MQ=255) cAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAaga > 1:4158672/1‑57 (MQ=255) cAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAaga > 1:6332741/1‑57 (MQ=255) cAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAaga > 1:741697/1‑57 (MQ=255) aggaaggaAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTc > 1:4733440/1‑70 (MQ=255) aggaaggaAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTc < 1:2839293/70‑1 (MQ=255) aggaaggaAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTc < 1:1408852/70‑1 (MQ=255) aggaaggaAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTc < 1:3477201/70‑1 (MQ=255) aggaaggaAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCg < 1:586065/71‑1 (MQ=255) ggaaggaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGa < 1:3297663/71‑1 (MQ=255) ggaaggaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGa < 1:2177334/71‑1 (MQ=255) ggaaggaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGa < 1:2676920/71‑1 (MQ=255) gaaggaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGat < 1:2377755/71‑1 (MQ=255) gaaggaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGat < 1:2569314/71‑1 (MQ=255) gaaggaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGat < 1:3859081/71‑1 (MQ=255) gaaggaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGat < 1:6492231/71‑1 (MQ=255) gaaggaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGa > 1:3956252/1‑70 (MQ=255) gaaggaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGa > 1:3992106/1‑70 (MQ=255) aaggaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGata < 1:203907/71‑1 (MQ=255) aaggaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGata < 1:2871748/71‑1 (MQ=255) aggaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaaaaa > 1:3642725/1‑50 (MQ=255) aggaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaaaaa > 1:1048726/1‑50 (MQ=255) aggaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaaaaa > 1:2705997/1‑50 (MQ=255) aggaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaaaaa > 1:4909830/1‑50 (MQ=255) ggaaATGCGAGTGATTTCACCGTCACCGGCACAACCg < 1:4018146/37‑1 (MQ=255) ggaaATGCGAGTGATTTCACCGTCACCGGCACAACCg < 1:4779623/37‑1 (MQ=255) | ACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATA > minE/1611688‑1611824 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |