New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | minE | = 1590976 | 48 (0.890) | 4 (0.080) | 3/90 | NT | 8.7% | coding (170/735 nt) | yfeS | conserved hypothetical protein |
? | minE | = 1590999 | 41 (0.850) | coding (193/735 nt) | yfeS | conserved hypothetical protein |
GTAGTATTGGTAAATTCCAGACAAAAGAGTTCGATAATGAAGAACAGTGTCTGAAAGAAGCCAGTAAATTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1590904‑1590976 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgatAGCCTTTCTTCATTTTTGCGGCAATCA < minE/1590999‑1590973 GTAGTATTGGTAAATTCCAGACAAAAGAGTTCGATAATGAAGAACAGTGTCTGAAAGAAGCCAGTAAATTG < 1:2112366/71‑1 GTAGTATTGGTAAATTCCAGACAAAAGAGTTCGATAATGAAGAACAGTGTCTGAAAGAAGCCAGTAAATTG < 1:2633443/71‑1 GTAGTATTGGTAAATTCCAGACAAAAGAGTTCGATAATGAAGAACAGTGTCTGAAAGAAGCCAGTAAATTG < 1:3017760/71‑1 GTAGTATTGGTAAATTCCAGACAAAAGAGTTCGATAATGAAGAACAGTGTCTGAAAGAAGCCAGTAAATTG < 1:3396629/71‑1 GTAGTATTGGTAAATACCAGACAAAAGAGTTCGATAATGAAGAACAGTGTCTGAAAGAAGCCAGTAAATTG < 1:3282525/71‑1 TTCGATAATGAAGAACAGTGTCTGAAAGAAGCCAGTAAATTGATAGCCTTTCTTCATTTTTGCGGCAATCA < 1:3438890/71‑1 TGAAAGAAGCCAGTAAATTGATAGCCTTTCTTCATTTTTGCGGCA < 1:605622/45‑1 TGAAAGAAGCCAGTAAATTGATAGCCTTTCTTCATTTTTGCGGCA < 1:65900/45‑1 AAAGAAGCCAGTAAATTGATAGCCTTTCTTCATTTTTGCGGCAAT > 1:2778663/1‑45 GTAGTATTGGTAAATTCCAGACAAAAGAGTTCGATAATGAAGAACAGTGTCTGAAAGAAGCCAGTAAATTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1590904‑1590976 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgatAGCCTTTCTTCATTTTTGCGGCAATCA < minE/1590999‑1590973 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |