| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1590976 | 48 (0.890) | 4 (0.080) | 3/90 | NT | 8.7% | coding (170/735 nt) | yfeS | conserved hypothetical protein |
| ? | minE | = 1590999 | 41 (0.850) | coding (193/735 nt) | yfeS | conserved hypothetical protein | |||||
GTATTGGTAAATTCCAGACAAAAGAGTTCGATAATGAAGAACAGTGTCTGAAAGAAGCCAGTAAATTGATTGCCGCAAAAATGAAGAAAGGCTATCAAGAAGATCCAAAGTTTAACTTCATGGATCGCTACTATTTT > minE/1590907‑1591043 | gtaTTGGTAAATTCCAGACAAAAGAGTTCGATAATGAAGAACAGTGTCTGAAAGAAGCCAGTAAattgatt < 1:250576/71‑1 (MQ=255) taTTGGTAAATTCCAGACAAAAGAGTTCGATAATGAAGAACAGTGTCTGAAAGAAGCCAGTAAattgattg < 1:1348252/71‑1 (MQ=255) ttGGTAAATTCCAGACAAAAGAGTTCGATAATGAAGAACAGTGTCTGAAAGAAGCCAGTAAATTGATTGcc > 1:215187/1‑71 (MQ=255) gTAAATTCCAGACAAAAGAGTTCGATAATGAAGAACAGTGTCTGAAAGAAGCCAGTAAATTGATTGCCg > 1:1470392/1‑69 (MQ=255) gTAAATTCCAGACAAAAGAGTTCGATAATGAAGAACAGTGTCTGAAAGAAGCCAGTAAATTGATTGCCGc < 1:1169811/70‑1 (MQ=255) gTAAATTCCAGACAAAAGAGTTCGATAATGAAGAACAGTGTCTGAAAGAAGCCAGTAAATTGATTGCCGc > 1:2905668/1‑70 (MQ=255) gTAAATTCCAGACAAAAGAGTTCGATAATGAAGAACAGTGTCTGAAAGAAGCCAGTAAATTGATTGCCGc > 1:1783754/1‑70 (MQ=255) tAAATTCCAGACAAAAGAGTTCGATAATGAAGAACAGTGTCTGAAAGAAGCCAGTAAATTGATTGCCGc < 1:2383605/69‑1 (MQ=255) aaTTCCAGACAAAAGAGTTCGATGATGAAGAACAGTGTCTGAAAGAAGCCAGTAAATTGATTGCCGCaaa > 1:56296/1‑70 (MQ=255) aaTTCCAGACAAAAGAGTTCGATAATGAAGAACAGTGTCTGAAAGAAGCCAGTAAATTGATTGCCGCaa > 1:542181/1‑69 (MQ=255) aTTCCAGACAAAAGAGTTCGATAATGAAGAACAGTGTCTGAAAGAAGCCAGTAAATTGATTGCCGCaaaaa > 1:1694165/1‑71 (MQ=255) aTTCCAGACAAAAGAGTTCGATAATGAAGAACAGTGTCTGAAAGAAGCCAGTAAATTGATTGCCGCaaaaa > 1:1959764/1‑71 (MQ=255) ttCCAGACAAAAGAGTTCGATAATGAAGAACAGTGTCTGAAAGAAGCCAGTAAATTGATTGCCGCAAAAAt > 1:230246/1‑71 (MQ=255) gACAAAAGAGTTCGATAATGAAGAACAGTGTCTGAAAGAAGCCAGTAAATTGATTGCCGCAAAAATgaag > 1:3202007/1‑70 (MQ=255) gACAAAAGAGTTCGATAATGAAGAACAGTGTCTGAAAGAAGCCAGTAAATTGATTGCCGCAAAAATgaag > 1:939830/1‑70 (MQ=255) aCAAAAGAGTTCGATAATGAAGAACAGTGTCTGAAAGAAGCCAGTAAATTGATTGCCGCAAAAATgaagaa < 1:1341874/71‑1 (MQ=255) cAAAAGAGTTCGATAATGAAGAACAGTGTCTGAAAGAAGCCAGTAAATTGATTGCCGCAAAAATGAAGaaa < 1:1148204/71‑1 (MQ=255) aaaaGAGTTCGATAATGAAGAACAGTGTCTGAAAGAAGCCAGTAAATTGATTGCCGCAAAAATGAAGAAAg > 1:1661878/1‑71 (MQ=255) aaaaGAGTTCGATAATGAAGAACAGTGTCTGAAAGAAGCCAGTAAATTGATTGCCGCAAAAATGAAGAAAg > 1:495369/1‑71 (MQ=255) agagTTCGATAATGAAGAACAGTGTCTGAAAGAAGCCAGTAAATTGATTGCCGCAAAAATgaag < 1:3012391/64‑1 (MQ=255) ttCGATAATGAAGAACAGTGTCTGAAAGAAGCCAGTAAATTGATagcctttcttcatttttgcggcaatca < 1:3438890‑M1/71‑28 (MQ=255) aaTGAAGAACAGTGTCTGAAAGAAGCAAGTAAATTGATTGCCGCAAAAATGAAGAAAGGCTATCaag > 1:3015471/1‑67 (MQ=255) aaTGAAGAACAGTGTCTGAAAGAAGCAAGTAAATTGATTGCCGCAAAAATGAAGAAAGGCTATCaag > 1:3015470/1‑67 (MQ=255) aCAGTGTCTGAAAGAAGCCAGTAAATTGATTGCCGCAAAAATGAAGAAAGGCTATCAAGAAGATCCAAAGt > 1:2844232/1‑71 (MQ=255) aCAGTGTCTGAAAGAAGCCAGTAAATTGATTGCCGCAAAAATGAAGAAAGGCTATCAAGAAGATCCAAAGt > 1:2807363/1‑71 (MQ=255) cAGTGTCTGAAAGAAGCCAGTAAATTGATTGCCGCAAAAATGAAGAAAGGCTATCAAGAAGATCCAAAGtt > 1:1086036/1‑71 (MQ=255) cAGTGTCTGAAAGAAGCCAGTAAATTGATTGCCGCAAAAATGAAGAAAGGCTATCAAGAAGATCCAAAGtt < 1:2051318/71‑1 (MQ=255) aGTGTCTGAAAGAAGCCAGTAAATTGATTGCCGCAAAAATGAAGAAAGGCTATCAAGAAGATCCAAAGttt < 1:427225/71‑1 (MQ=255) gtgtCTGAAAGAAGCCAGTAAATTGATTGCCGCAAAAATGAAGAAAGGCTATCAAGAAGATCCAAAGttt > 1:158371/1‑70 (MQ=255) gtgtCTGAAAGAAGCCAGTAAATTGATTGCCGCAAAAATGAAGAAAGGCTATCAAGAAGATCCAAAGttt > 1:3323918/1‑70 (MQ=255) tCTGAAAGAAGCCAGTAAATTGATTGCCGCAAAAATGAAGAAAGGCTATCAAGAAGATCCAAAGt < 1:1617164/65‑1 (MQ=255) tCTGAAAGAAGCCAGTAAATTGATTGCCGCAAAAATGAAGAAAGGCTATCAAGAAGATCCAAAGt < 1:1256239/65‑1 (MQ=255) tCTGAAAGAAGCCAGTAAATTGATTGCCGCAAAAATGAAGAAAGGCTATCAAGAAGATCCAAAGt < 1:3181847/65‑1 (MQ=255) tGAAAGAAGCCAGTAAATTGATagcctttcttcatttttgcggca < 1:605622‑M1/45‑24 (MQ=255) tGAAAGAAGCCAGTAAATTGATagcctttcttcatttttgcggca < 1:65900‑M1/45‑24 (MQ=255) gAAAGAAGCCAGTAAATTGATTGCCGCAAAAATGAAGAAAGGCTATCAAGAAGATCCAAAGTTTAACTTCa > 1:3349416/1‑71 (MQ=255) aaaGAAGCCAGTCAATTGATTGCCGCAAAAATGAAGAAAGGCTATCAAGAAGATCCAAAGTTTAACtt < 1:2403091/68‑1 (MQ=255) aaaGAAGCCAGTAAATTGATagcctttcttcatttttgcggcaat > 1:2778663‑M1/1‑20 (MQ=255) aaaGAAGCCAGTAAATTGATTGCCGCAAAAATGAAGAAAGGCTATCAAGAAGATCCaa > 1:977985/1‑58 (MQ=255) aaaGAAGCCAGTAAATTGATTGCCGCAAAAATGAAGAAAGGCTATCAAGAAGATCCAAAGTTTa < 1:1332184/64‑1 (MQ=255) aaaGAAGCCAGTAAATTGATTGCCGCAAAAATGAAGAAAGGCTATCAAGAAGATCCAAAGTTTAACtt < 1:2026857/68‑1 (MQ=255) aaaGAAGCCAGTAAATTGATTGCCGCAAAAATGAAGAAAGGCTATCAAGAAGATCCAAAGTTTAACtt < 1:945624/68‑1 (MQ=255) aaaGAAGCCAGTAAATTGATTGCCGCAAAAATGAAGAAAGGCTATCAAGAAGATCCAAAGTTTAACtt < 1:5249/68‑1 (MQ=255) aaaGAAGCCAGTAAATTGATTGCCGCAAAAATGAAGAAAGGCTATCAAGAAGATCCAAAGTTTAACTTCAt > 1:346854/1‑71 (MQ=255) aagaagCCAGTAAATTGATTGCCGCAAAAATTAAGAAAGGCTATCAAGAAGATCCAAAGTTTAACTTCATg > 1:894983/1‑71 (MQ=255) agaagCCAGTAAATTGATTGCCGCAAAAATGAAGAAAGGCTATCAAGAAGATCCAAAGTTTAACTTCATgg < 1:3098796/71‑1 (MQ=255) agaagCCAGTAAATTGATTGCCGCAAAAATGAAGAAAGGCTATCAAGAAGATCCAAAGTTTAACTTCATgg < 1:2379260/71‑1 (MQ=255) aagCCAGTAAATTGATTGCCGCAAAAATGAAGAAAGGCTATCAAGAAGATCCAAAGTTTAACTTCATGGAt < 1:730604/71‑1 (MQ=255) aagCCAGTAAATTGATTGCCGCAAAAATGAAGAAAGGCTATCAAGAAGATCCAAAGTTTAACTTCATGGAt < 1:2267327/71‑1 (MQ=255) aagCCAGTAAATTGATTGCCGCAAAAATGAAGAAAGGCTATCAAGAAGATCCAAAGTTTAACTTCATGGAt < 1:2305397/71‑1 (MQ=255) agCCAGTAAATTGATTGCCGCAAAAATGAAGAAAGGCTATCAAGAAGATCCAAAGTTTAACTTCATGGAt < 1:1656433/70‑1 (MQ=255) gTAAATTGATTGCCGCAAAAATGAAGAAAGGCTATCaaga < 1:715643/40‑1 (MQ=255) gTAAATTGATTGCCGCAAAAATGAAGAAAGGCTATCaaga < 1:3335591/40‑1 (MQ=255) tAAATTGATTGCCGCAAAAATGAAGAAAGGCTATCAAGAAGATCCAAAGTTTAACTTCATGGAt < 1:717169/64‑1 (MQ=255) tAAATTGATTGCCGCAAAAATGAAGAAAGGCTATCAAGAAGATCCAAAGTTTAACTTCATGGAt < 1:792422/64‑1 (MQ=255) aaaTTGATTGCCGCAAAAATGAAGAAAGGCTATCAAGAAGATCCAAAGttt < 1:3465335/51‑1 (MQ=255) tgattgCCGCAAAAATGAAGAAAGGCTatcaatttactggcttctttcagacactgttcttcattatcgaa < 1:3438890‑M2/71‑45 (MQ=255) tgattgCCGCAAAAATGAAGAAAGGCTATCAAGAAGATCCAAAGTTTAACTTCa > 1:2558666/1‑54 (MQ=255) tgattgCCGCAAAAATGAAGAAAGGCTATCAAGAAGATCCAAAGTTTAACTTCa > 1:322727/1‑54 (MQ=255) tgattgCCGCAAAAATGAAGAAAGGCTATCAAGAAGATCCAAAGTTTAACTTCa > 1:2589883/1‑54 (MQ=255) gattgCCGCAAAAATGAAGAAAGGCTATCAAGAAGATCCAAAGTTTAACTTCATGGATCGCTACTAtttt > 1:2674063/1‑70 (MQ=255) attgCCGCAAAAATGAAGAAAGGCTatcaatttactggcttcttt > 1:2778663‑M2/1‑25 (MQ=255) | GTATTGGTAAATTCCAGACAAAAGAGTTCGATAATGAAGAACAGTGTCTGAAAGAAGCCAGTAAATTGATTGCCGCAAAAATGAAGAAAGGCTATCAAGAAGATCCAAAGTTTAACTTCATGGATCGCTACTATTTT > minE/1590907‑1591043 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |