New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | minE | = 2059386 | 89 (1.660) | 8 (0.160) | 3/94 | NT | 8.7% | coding (650/1464 nt) | ygjE | predicted tartrate:succinate antiporter |
? | minE | = 2059405 | 85 (1.690) | coding (669/1464 nt) | ygjE | predicted tartrate:succinate antiporter |
TCATGTGGATGGGGATTGTTGCCGACTGCGTGACCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2059314‑2059386 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctTTTCATCAGTCCAATTAACAGCAAGTTT < minE/2059405‑2059378 TCATGTGGATGGGGATTGTTGCCGACTGCGTGACCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTG > 1:1780516/1‑71 TGTTGCCGACTGCGTGACCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTTTTCATCAGTCCAA > 1:2265179/1‑71 TGTTGCCGACTGCGTGACCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTTTTCATCAGTCCAA > 1:2739826/1‑71 TGACCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTTTTCATCAGTCCAATTAACAGCAAGTTT < 1:1807036/71‑1 TGACCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTTTTCATCAGTCCAATTAACAGCAAGTTT < 1:3190141/71‑1 CGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTTTTCATCAGTCCAATTAACAGCAAGTTT < 1:2590711/64‑1 CATTTTCTTGACGGCGATGTCACCAAACTTGCTTTTCATCAGTCCAATTAACAGCAAG < 1:1988725/58‑1 CATTTTCTTGACGGCGATGGCACCAAACTTGCTTTTCATCAGTCCAATTAACAGCAAG < 1:1140384/58‑1 CATTTTCTTGACGGCGATGGCACCAAACTTGCTTTTCATCAGTCCAATTAACAGCAAG < 1:532607/58‑1 TCATGTGGATGGGGATTGTTGCCGACTGCGTGACCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2059314‑2059386 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctTTTCATCAGTCCAATTAACAGCAAGTTT < minE/2059405‑2059378 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |