BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	minE	= 2059386	89 (1.660)	8 (0.160)	3/94	NT	8.7%	coding (650/1464 nt)	ygjE	predicted tartrate:succinate antiporter
*	?	minE	= 2059405	85 (1.690)	8 (0.160)	3/94	NT	8.7%	coding (669/1464 nt)	ygjE	predicted tartrate:succinate antiporter

Only 100 of 115 total aligned reads displayed.

TGGATGGGGATTGTTGCCGACTGCGTGACCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGAGTTGGGGCGACTGGTTCCTCGGGATGT  >  minE/2059319‑2059454

tgGATGGGGATTGTTGCCGACTGCGTGACCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGtt                                                                   <  1:913694/71‑1 (MQ=255)

tgGATGGGGATTGTTGCCGACTGCGTGACCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGtt                                                                   <  1:2846325/71‑1 (MQ=255)

tgGATGGGGATTGTTGCCGACTGCGTGACCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGtt                                                                   <  1:3057692/71‑1 (MQ=255)

tgGATGGGGATTGTTGCCGACTGCGTGACCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGt                                                                    <  1:2412488/70‑1 (MQ=255)

  gATGGGGATTGTTGCCGACTGCGTGACCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGTTaa                                                                 <  1:3047964/71‑1 (MQ=255)

    tGGGGATTGTTGCCGACTGCGTGACCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGTTAAtt                                                               >  1:1210273/1‑71 (MQ=255)

      gggATTGTTGCCGACTGCGTGACCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGTTAATTg                                                              <  1:2540119/70‑1 (MQ=255)

      gggATTGTTGCCGACTGCGTGACCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGTTAATTg                                                              <  1:3385577/70‑1 (MQ=255)

      gggATTGTTGCCGACTGCGTGACCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGTTAATTg                                                              <  1:1469043/70‑1 (MQ=255)

      gggATTGTGGCCGACTGCGTGACCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGTTAATTg                                                              <  1:2544359/70‑1 (MQ=255)

         aTTGTTGCCGACTGCGTGACCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGTTAATTGGACt                                                          <  1:2558863/71‑1 (MQ=255)

          ttgttgCCGACTGCGTGACCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGTTAATTGGACtg                                                         <  1:875271/71‑1 (MQ=255)

          ttgttgCCGACTGCGTGACCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGTTAATTGGACtg                                                         <  1:3212496/71‑1 (MQ=255)

           tgttgCCGACTGCGTGACCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTtttcatcagtccaa                                                        >  1:2739826‑M1/1‑57 (MQ=255)

            gttgCCGACTGCGTGACCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGTTAATTGGACtgat                                                       >  1:1543899/1‑71 (MQ=255)

            gttgCCGACTGCGTGACCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGTTAATTGGACtgat                                                       >  1:1597346/1‑71 (MQ=255)

            gttgCCGACTGCGTGACCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGTTAATTGGACtga                                                        <  1:2581671/70‑1 (MQ=255)

                  gACTGCGTGACCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGTTAAtt                                                               >  1:2635039/1‑57 (MQ=255)

                   aCTGCGTGACCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGtt                                                                   <  1:1859194/52‑1 (MQ=255)

                      gCGTGACCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGTTAATTGGACtgatga                                                     <  1:88172/63‑1 (MQ=255)

                       cGTGACCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAgcgc                                              <  1:2170157/69‑1 (MQ=255)

                       cGTGACCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAgcgc                                              <  1:427103/69‑1 (MQ=255)

                       cGTGACCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAgcgc                                              <  1:2944021/69‑1 (MQ=255)

                       cGTGACCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCa                                             <  1:3010529/70‑1 (MQ=255)

                         tGACCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTtttcatcagtccaattaacagcaagttt                                          <  1:3190141‑M1/71‑29 (MQ=255)

                           aCCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCAtctc                                         <  1:317392/70‑1 (MQ=255)

                           aCCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCAtctc                                         <  1:180783/70‑1 (MQ=255)

                           aCCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCATCTca                                        <  1:654878/71‑1 (MQ=255)

                           aCCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCATCTca                                        <  1:338623/71‑1 (MQ=255)

                           aCCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCATCTca                                        <  1:1169761/71‑1 (MQ=255)

                           aCCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGTTAATTGGACTGATGAAAACCGCATCTca                                        <  1:2547287/71‑1 (MQ=255)

                           aCCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAACGCATCTca                                        <  1:2543057/71‑1 (MQ=255)

                            ccAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCATCTcac                                       >  1:897830/1‑71 (MQ=255)

                            ccAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCATCTcac                                       >  1:1854010/1‑71 (MQ=255)

                            ccAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCATCTcac                                       >  1:232512/1‑71 (MQ=255)

                            ccAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCATCTcac                                       >  1:357674/1‑71 (MQ=255)

                            ccAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCATCTca                                        >  1:1876879/1‑70 (MQ=255)

                               gcgcCATTTTCTTGACGGCGATGGCACCAAACTTGCTGTTaa                                                                 >  1:3026740/1‑42 (MQ=255)

                                cgcCATTTTCTTGACGGCGATGGCACCAAACTTGCTtttcatcagtccaattaacagcaagttt                                          <  1:2590711‑M1/64‑29 (MQ=255)

                                 gcCATTTTCTTGACGGCGATGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCATCTcacgccac                                  >  1:2795630/1‑71 (MQ=255)

                                   cATTTTCTTGACGGCGATGGCACCAAACTTGCTtttcatcagtccaattaacagcaag                                             <  1:532607‑M1/58‑26 (MQ=255)

                                   cATTTTCTTGACGGCGATGGCACCAAACTTGCTtttcatcagtccaattaacagcaag                                             <  1:1140384‑M1/58‑26 (MQ=255)

                                    aTTTTCTTGACGGCGATGGCACCAAACTTGCTGTTa                                                                  <  1:309549/36‑1 (MQ=255)

                                    aTTTTCTTGACGGCGATGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCt                               <  1:1112902/71‑1 (MQ=255)

                                    aTTTTCTTGACGGCGATGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCt                               <  1:1385433/71‑1 (MQ=255)

                                     ttttGTTGACGGCGATGGCACCAAACTTGCTGTTAATTg                                                              <  1:3447889/39‑1 (MQ=255)

                                     ttttCTTGACGGCGATGGCACCAAACTTGCTGTTAATTg                                                              <  1:3039435/39‑1 (MQ=255)

                                     ttttCTTGACGGCGATGGCACCAAACTTGCTGTTAATTg                                                              <  1:1446516/39‑1 (MQ=255)

                                     ttttCTTGACGGCGATGGCACCAAACTTGCTGTTAATTg                                                              <  1:2763721/39‑1 (MQ=255)

                                     ttttCTTGACGGCGATGGCACCAAACTTGCTGTTAATTg                                                              <  1:2640809/39‑1 (MQ=255)

                                     ttttCTTGACGGCGATGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTg                              <  1:2106005/71‑1 (MQ=255)

                                       ttCTTGACGGCGATGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGa                             <  1:2739177/70‑1 (MQ=255)

                                       ttCTTGACGGCGATGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGAg                            >  1:2888784/1‑71 (MQ=255)

                                       ttCTTGACGGCGATGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGAg                            >  1:2069598/1‑71 (MQ=255)

                                       ttCTTGACGGCGATGGCACCAAACTTGCTGTTAATTGGACCGATGAAAAGCGCATCTCACACCACGCTGAg                            >  1:328980/1‑71 (MQ=255)

                                        tCTTGACGGCGATGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGa                             <  1:637798/69‑1 (MQ=255)

                                        tCTTGACGGCGATGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGa                             <  1:1782292/69‑1 (MQ=255)

                                          ttGACGGCGATGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGAGTTg                         >  1:1010091/1‑71 (MQ=255)

                                          ttGACGGCGATGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGAGTTg                         >  1:1968891/1‑71 (MQ=255)

                                            gACGGCGATGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGAGTTgg                        <  1:176411/70‑1 (MQ=255)

                                            gACGGCGATGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGAGTTgg                        <  1:2988634/70‑1 (MQ=255)

                                            gACGGCGATGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGAGTTgg                        >  1:416282/1‑70 (MQ=255)

                                               ggCGATGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGAGTTGGGGCg                    <  1:2521550/71‑1 (MQ=255)

                                                 cGATGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGAGTTGGGGCGAc                  >  1:1115737/1‑71 (MQ=255)

                                                  gATGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGAGTTGGGGCGACt                 <  1:2535153/71‑1 (MQ=255)

                                                    tGGCACCAAACTTGCTGTTAATTGGACTGATGAAAGGCGCATCTCACGCCACGCTGAGTTGGGGCGACTgg               <  1:3290511/71‑1 (MQ=255)

                                                    tGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGAGTTGGGGCGACTgg               >  1:1028259/1‑71 (MQ=255)

                                                    tGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGAGTTGGGGCGACTgg               >  1:225957/1‑71 (MQ=255)

                                                    tGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGAGTTGGGGCGACTgg               >  1:2987014/1‑71 (MQ=255)

                                                     ggCACCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGAGTTGGGGCGACTgg               <  1:1289735/70‑1 (MQ=255)

                                                      gCACCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGAGTTGGGGCGACTGGt              <  1:271991/70‑1 (MQ=255)

                                                        aCCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGAGTTGGGGCGACTGGTTcc           >  1:1109633/1‑71 (MQ=255)

                                                         ccAAACTTGCTGTTAATTGGACTGATGAAAAGCGCATCTcacgccac                                  <  1:2137832/47‑1 (MQ=255)

                                                         caaaaCTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGAGTTGGGGCGACTGGTTCCt          >  1:2335768/3‑71 (MQ=255)

                                                           aaaCTTGCTGTTAATTGGACTGATGAAAagcaagtttggtgccatcgccgtcaagaaaatggcgctggtca        <  1:1807036‑M2/71‑44 (MQ=255)

                                                           aaaCTTGCTGTTAATTGGACTGATGAAAagcaagtttggtgccatcgccgtcaagaaaatggcgctggtca        <  1:3190141‑M2/71‑44 (MQ=255)

                                                           aaaCTTGCTGTTAATTGGACTGATGAAAagcaagtttggtgccatcgccgtcaagaaaatggcg               <  1:2590711‑M2/64‑37 (MQ=255)

                                                           aaaCTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGa                             >  1:2395354/1‑50 (MQ=255)

                                                           aaaCTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGa                             >  1:1672987/1‑50 (MQ=255)

                                                           aaaCTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGa                             >  1:512833/1‑50 (MQ=255)

                                                           aaaCTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGAGTTggg                       >  1:807317/1‑56 (MQ=255)

                                                           aaaCTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGAGTTggg                       >  1:289508/1‑56 (MQ=255)

                                                           aaaCTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGAGTTGGGGCGACTGGTTCCTCg        >  1:1221940/1‑71 (MQ=255)

                                                           aaaCTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGAGTTGGGGCGACTGGTTCCTCg        >  1:2410501/1‑71 (MQ=255)

                                                           aaaCTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGAGTTGGGGCGACTGGTTCCTCg        >  1:2925454/1‑71 (MQ=255)

                                                           aaaCTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGAGTTGGGGCGACTGGTTCCTCg        >  1:2969919/1‑71 (MQ=255)

                                                           aaaCTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGAGTTGGGGCGACT‑GTTCCTCgg       >  1:3025150/1‑71 (MQ=255)

                                                           aaaCTTGCTGTTAATTGGACTGATGAAAAGCGCATCACACGCCACGCTGa                             >  1:3156521/1‑50 (MQ=255)

                                                            aaCTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGAGTTGGGGCGACTGGTTCCTCgg       >  1:1132351/1‑71 (MQ=255)

                                                             aCTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGAGTTGGGGCg                    >  1:258999/1‑57 (MQ=255)

                                                             aCTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGAGTTGGGGCGa                   >  1:2578308/1‑58 (MQ=255)

                                                             aCTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGAGTTGGGGCGa                   >  1:2348779/1‑58 (MQ=255)

                                                             aCTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGAGTTGGGGCGACTGGTTCCTCggg      <  1:1592759/71‑1 (MQ=255)

                                                             aCTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGAGTTGGGGCGACTGGTTCCTCgg       >  1:445588/1‑70 (MQ=255)

                                                             aCTTGCTGTTAATTGGACTGAGGAAAAGCGCATCTCACGCCACGCTGAGTTGGGGCGa                   >  1:3104744/1‑58 (MQ=255)

                                                              cTTGCTGTTAATTGGACTGATGAAAagcaagtttggtgccatcgccgtcaagaaaatg                  <  1:532607‑M2/58‑34 (MQ=255)

                                                              cTTGCTGTTAATTGGACTGATGAAAagcaagtttggtgacatcgccgtcaagaaaatg                  <  1:1988725‑M2/58‑34 (MQ=255)

                                                              cTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGAGTTGGGGCGAc                  <  1:1846075/58‑1 (MQ=255)

                                                                  cTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGAGTTGGGGCGACTGGTTCCTCGGGATGt  <  1:752633/70‑1 (MQ=255)

                                                                   tGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCt                               <  1:2141695/40‑1 (MQ=255)

TGGATGGGGATTGTTGCCGACTGCGTGACCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGAGTTGGGGCGACTGGTTCCTCGGGATGT  >  minE/2059319‑2059454

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.