New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	W3110S.gb	= 1499913	17 (0.440)	12 (0.390) +ATATCACCAG	5/78	NT	32.7%	coding (1314/1626 nt)	mdoD	glucan biosynthesis protein, periplasmic
	?	W3110S.gb	1787483 =	45 (1.170)					coding (1344/2379 nt)	pps	phosphoenolpyruvate synthase

CAGGTGAACACTATCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  W3110S.gb/1499897‑1499913 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCACCGTCTTTCAT  >  W3110S.gb/1787483‑1787497                  ||||||||||                agGGTGAACACTATCCCATATCACCAGCTCACCGTCTTTCA   >  1:404936/3‑41  gGGTGAACACTATCCCATATCACCAGCTCACCGTCTTTCA   >  1:1679327/2‑40  gGGTGAACACTATCCCATATCACCAGCTCACCGTCTTT     <  1:2251329/37‑1   GGTGAACAGTATCCCATATCACCAGCTCACCGTCTTTC    <  1:2856048/38‑1   GGTGAACACTATCCCAAATCACCAGCTCACCGTCTTT     <  1:1430151/37‑1    GTGAACACTATCCCATATCACCAGCTCACCGTCTTTCA   >  1:1009086/1‑38     TGAACACTATCCCATATCACCAGCTCACCGTCTTTCA   <  1:3180755/37‑1       AACACTATCCCATATCACCAGCTCACCGTCTTTCAT  >  1:2564824/1‑36       AACACTATCCCATATCACCAGCTCACCGTCTTTCA   >  1:1030130/1‑35       AACACTATCCCATATCACCAGCTCACCGTCTTTCA   >  1:2385434/1‑35       AACACTATCCCATATCACCAGCTCACCGTCTTTCA   >  1:3079413/1‑35       AACACTATCCCATATCACCAGCTCACCGTCTTTCA   <  1:3191893/35‑1                  ||||||||||                CAGGTGAACACTATCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  W3110S.gb/1499897‑1499913 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCACCGTCTTTCAT  >  W3110S.gb/1787483‑1787497

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.