| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 1499913 | 17 (0.440) | 12 (0.390) +ATATCACCAG |
5/78 | NT | 32.7% | coding (1314/1626 nt) | mdoD | glucan biosynthesis protein, periplasmic |
| ? | W3110S.gb | 1787483 = | 45 (1.170) | coding (1344/2379 nt) | pps | phosphoenolpyruvate synthase | |||||
CGCTAAATTCCAGCAACTCCGCATAGACGTAACCGGTATCACCTTCGGCACAAGAAACAGTGACGTTCTCACCGTCTTTCATCCGTTCTGTTGCATCTCCACAGCCCACTACCGCCGGAATGCCCAGTTCACGAGCGA > W3110S.gb/1787416‑1787553 | cGCTAAATTCCAGCAACTCCGCATAGACGTAACCGGTATCACCTTCGGCACAAGAAACAGTGACGTTCTCa > 1:1453645/1‑71 (MQ=255) cTAAATTCCAGCAACTCCGCATAGACGTAACCGGTATCACCTTCGGCACAAGAAACAGTGACGTTCTCAcc > 1:1130099/1‑71 (MQ=255) cTAAATTCCAGCAACTCCGCATAGACGTAACCGGTATCACCTTCGGCACAAGAAACAGTGACGTTCTCAc > 1:539093/1‑70 (MQ=255) aaTTCCAGCAACTCCGCATAGACGTAACCGGTATCACCTTCGGCACAAGAAACAGTGACGTTCTCACCGTc > 1:3267161/1‑71 (MQ=255) aaTTCCAGCAACTCCGCATAGACGTAACCGGTATCACCTTCGGCACAAGAAACAGTGACGTTCTCACCGTc > 1:2967301/1‑71 (MQ=255) ttCCAGCAACTCCGCATAGACGTAACCGGTATCACCTTCGGCACAAGAAACAGTGACGTTCTCACCGTCtt > 1:896132/1‑71 (MQ=255) ttCCAGCAACTCCGCATAGACGTAACCGGTATCACCTTCGGCACAAGAAACAGTGACGTTCTCACCGTCtt < 1:1689389/71‑1 (MQ=255) tCCAGCAACTCCGCATAGACGTAACCGGTATCACCTTCGGCACAAGAAACAGTGACGTTCTCACCGTCttt > 1:764209/1‑71 (MQ=255) ccAGCAACTCCGCATAGACGTAACCGGTATCACCTTCGGCACAAGAAACAGTGACGTTCTCACCGTCttt > 1:3332063/1‑70 (MQ=255) gCAACTCCGCATAGACGTAACCGGTATCACCTTCGGCACAAGAAACAGTGACGTTCTCACCGTCTTTCATc > 1:835371/1‑71 (MQ=255) ccGCATAGACGTAACCGGTATCACCTTCGGCACAAGAAACAGTGACGTtct < 1:2644154/51‑1 (MQ=255) ccGCATAGACGTAACCGGTATCACCTTCGGCACAAGAAACAGTGACGTTCTCACCGTCTTTCATCCGTTCt > 1:1185494/1‑71 (MQ=255) ccGCATAGACGTAACCGGTATCACCTTCGGCACAAGAAACAGTGACGTTCTCACCGTCTTTCATCCGTTCt > 1:1444047/1‑71 (MQ=255) cGCATAGACGTAACCGGTATCACCTTCGGCACAAGAAACAGTGACGTTCTCACCGTCTTTCATc > 1:2343659/1‑64 (MQ=255) cGCATAGACGTAACCGGTATCACCTTCGGCACAAGAAACAGTGACGTTCTCACCGTCTTTCATc > 1:1560661/1‑64 (MQ=255) cGCATAGACGTAACCGGTATCACCTTCGGCACAAGAAACAGTGACGTTCTCACCGTCTTTCATc > 1:3233236/1‑64 (MQ=255) cGCATAGACGTAACCGGTATCACCTTCGGCACAAGAAACAGTGACGTTCTCACCGTCTTTCATCCGTTc < 1:1655583/69‑1 (MQ=255) cGCATAGACGTAACCGGTATCACCTTCGGCACAAGAAACAGTGACGTTCTCACCGTCTTTCATCCGTTCt < 1:934002/70‑1 (MQ=255) aTAGACGTAACCGGTATCACCTTCGGCACAAGAAACAGTGACGTtctc < 1:3123398/48‑1 (MQ=255) tAGACGTAACCGGTATCACCTTCGGCACAAGAAACAGTGACGTTCTCACCGTCTTTCATCCGTTCTGTTg < 1:2107765/70‑1 (MQ=255) tAGACGTAACCGGTATCACCTTCGGCACAAGAAACAGTGACGTTCTCACCGTCTTTCATCCGTTCTGTTg < 1:3069540/70‑1 (MQ=255) aGACGTAACCGGTATCACCTTCGGCACAAGAAACAGTGACGTTCTCACCGTCTTTCATCCGTTCTGTTGCa > 1:2772013/1‑71 (MQ=255) aGACGTAACCGGTATCACCTTCGGCACAAGAAACAGTGACGTTCTCACCGTCTTTCATCCGTTCTGTTGCa > 1:3378508/1‑71 (MQ=255) gACGTAACCGGTATCACCTTCGGCACAAGAAACAGTGACGTtct > 1:1595805/1‑44 (MQ=255) aCGTAACCGGTATCACCTTCGGCACAAGAAACAGTGACGTTCTCACCGTCTTTCATCCGTTc > 1:2888421/1‑62 (MQ=255) aCGTAACCGGTATAACCTTCGGCACAAGAAACAGTGACGTTCTCACCGTCTTTCATCCGTTc > 1:3511387/1‑62 (MQ=255) ccGGTATCACCTTCGGCACAAGAAACAGTGACGTTCTCACCGTCTTTc < 1:924957/48‑1 (MQ=255) gTATCACCTTCGGCACAAGAAACAGTGACGTTCTCACCGTCTTTCATCCGTTCTGTTGCAtct > 1:2445730/1‑63 (MQ=255) aTCACCTTCGGCACAAGAAACAGTGACGTTCTCACCGTCTTTCATCCGTTCTGTTGCATCTCCACAGCCCa > 1:3580502/1‑71 (MQ=255) tCACCTTCGGCACAAGAAACAGTGACGTTCTCACCGTCTTTCa > 1:905529/1‑43 (MQ=255) tCACCTTCGGCACAAGAAACAGTGACGTTCTCACCGTCTTTCATCCGtt < 1:2400188/49‑1 (MQ=255) tCACCTTCGGCACAAGAAACAGTGACGTTCTCACCGTCTTTCATCCGTTCTGTTGCATCTCCACAGCCCAc > 1:2263345/1‑71 (MQ=255) agggtgaacactatcccatatcaccagCTCACCGTCTTTCa > 1:404936‑M2/28‑41 (MQ=255) aCCTTCGGCACAAGAAACAGTGACGTTCTCACCGTCTTTCATCCGTTCTGTTGCATCTCCACAGCCCACTa > 1:3559596/1‑71 (MQ=255) gggtgaacactatcccatatcaccagCTCACCGTCttt < 1:2251329‑M2/12‑1 (MQ=255) gggtgaacactatcccatatcaccagCTCACCGTCTTTCa > 1:1679327‑M2/27‑40 (MQ=255) ccTTCGGCACAAGAAACAGTGACGTTCTCACCGTCTTTCATCCGTTCTGTTGCATCTCca > 1:1120790/1‑60 (MQ=255) ccTTCGGCACAAGAAACAGTGACGTTCTCACCGTCTTTCATCCGTTCTGTTGCATCTCCACAGcc < 1:3385201/65‑1 (MQ=255) ccTTCGGCACAAGAAACAGTGACGTTCTCACCGTCTTTCATCCGTTCTGTTGCATCTCCACAGc > 1:3642293/1‑64 (MQ=255) ggtgaacagtatcccatatcaccagCTCACCGTCTTTc < 1:2856048‑M2/13‑1 (MQ=255) ggtgaacactatcccaaatcaccagCTCACCGTCttt < 1:1430151‑M2/12‑1 (MQ=255) gtgaacactatcccatatcaccagCTCACCGTCTTTCa > 1:1009086‑M2/25‑38 (MQ=255) tgaacactatcccatatcaccagCTCACCGTCTTTCa < 1:3180755‑M2/14‑1 (MQ=255) tCGGCACAAGAAACAGTGACGTTCTCACCGTCTTTc > 1:2765424/1‑36 (MQ=255) tCGGCACAAGAAACAGTGACGTTCTCACCGTCTTTc > 1:1869122/1‑36 (MQ=255) tCGGCACAAGAAACAGTGACGTTCTCACCGTCTTTCATCCGTTCTGTTGCATCTCCACAGCCCACTAccgc > 1:908368/1‑71 (MQ=255) cGGCACAAGAAACAGTGACGTTCTCACCGTCTTTCATCCGTTCTGTTGCATCTCCACAGCCCACTAccgcc > 1:946070/1‑71 (MQ=255) aacactatcccatatcaccagCTCACCGTCTTTCa > 1:1030130‑M2/22‑35 (MQ=255) aacactatcccatatcaccagCTCACCGTCTTTCa > 1:2385434‑M2/22‑35 (MQ=255) aacactatcccatatcaccagCTCACCGTCTTTCa < 1:3191893‑M2/14‑1 (MQ=255) aacactatcccatatcaccagCTCACCGTCTTTCa > 1:3079413‑M2/22‑35 (MQ=255) aacactatcccatatcaccagCTCACCGTCTTTCAt > 1:2564824‑M2/22‑36 (MQ=255) caAGAAACAGTGACGTTCTCACCGTCTTTCATCCGtt < 1:2763267/37‑1 (MQ=255) caAGAAACAGTGACGTTCTCACCGTCTTTCATCCGTTCTGTTGc < 1:3390801/44‑1 (MQ=255) caAGAAACAGTGACGTTCTCACCGTCTTTCATCCGTTCTGTTGCAtctc < 1:1151725/49‑1 (MQ=255) caAGAAACAGTGACGTTCTCACCGTCTTTCATCCGTTCTGTTGCATCTCCACAGCCCACt < 1:2516301/60‑1 (MQ=255) gAAACAGTGACGTTCTCACCGTCTTTCATCCGTTCTGt > 1:599305/1‑38 (MQ=255) gAAACAGTGACGTTCTCACCGTCTTTCATCCGTTCTGTTGCATCTCCACAGCCCACTACCGCCGGAATGcc > 1:402457/1‑71 (MQ=255) gAAACAGTGACGTTCTCACCGTCTTTCATCCGTTCTGTTGCATCTCCACAGCCCACTACCGCCGGAATGcc < 1:3327664/71‑1 (MQ=255) gAAACAGTGACGTTCTCACCGTCTTTCATCCGTTCTGTTGCATCTCCACAGCCCACTACCGCCGGAATGcc > 1:1369309/1‑71 (MQ=255) aGTGACGTTCTCACCGTCTTTCATCCGTTCTGTTGCATCTcc > 1:3025846/1‑42 (MQ=255) gTGACGTTCTCACCGTCTTTCATCCGTTCTGTTGCATCTCCACAGCCCACTACCGCCGGAATGCCCAGtt > 1:2773498/1‑70 (MQ=255) ctcACCGTCTTTCATCCGTTCTGTTGCATCTCCACAGcc > 1:3483944/1‑39 (MQ=255) ctcACCGTCTTTCATCCGTTCTGTTGCATCTCCACAGCCCACTACCGCCGGAATGCCCAGTTCACGAGCga > 1:3216057/1‑71 (MQ=255) ctcACCGTCTTTCATCCGTTCTGTTGCATCTCCACAGCCCACTACCGCCGGAATGCCCAGTTCACGAGCga > 1:1512002/1‑71 (MQ=255) ctcACCGTCTTTCATCCGTTCTGTTGCATCTCCACAGCCCACTACCGCCGGAATGCCCAGTTCACGAGCg < 1:2312754/70‑1 (MQ=255) | CGCTAAATTCCAGCAACTCCGCATAGACGTAACCGGTATCACCTTCGGCACAAGAAACAGTGACGTTCTCACCGTCTTTCATCCGTTCTGTTGCATCTCCACAGCCCACTACCGCCGGAATGCCCAGTTCACGAGCGA > W3110S.gb/1787416‑1787553 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |