| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 205097 = | 26 (0.680) | 54 (1.920) +TTATAACATTTTA |
21/72 | NT | 71.4% | intergenic (+8/‑29) | rnhB/dnaE | ribonuclease HII, degrades RNA of DNA‑RNA hybrids/DNA polymerase III alpha subunit |
| ? | W3110S.gb | 4139149 = | 33 (0.860) | coding (2/1023 nt) | frlB | fructoselysine‑6‑P‑deglycase | |||||
Only 100 of 116 total aligned reads displayed.
GACCGAACACCATCGGCGCAGCTTTGGGCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAACCACGTTTCGTACACCTGCGGGTGC > W3110S.gb/205029‑205159 | gACCGAACACCATCGGCGCAGCTTTGGGCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTc < 1:3364384/71‑1 (MQ=255) cGAACACCATCGGCGCAGCTTTGGGCCTGTCAAACGCGCACTGGGCCTTGCGTCCTGATTCTTGTGTc > 1:2097219/1‑68 (MQ=255) cGAACACCATCGGCGCAGCTTTGGGCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTc > 1:2040522/1‑68 (MQ=255) acacCATCGGCGCAGCTTTGGGCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGAtt < 1:1415451/71‑1 (MQ=255) cacCATCGGCGCAGCTTTGGGCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTa < 1:444790/71‑1 (MQ=255) acCATCGGCGCAGCTTTGGGCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTaa < 1:3220634/71‑1 (MQ=255) cATCGGCGCAGCTTTGGGCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTgtgt > 1:2517488/1‑60 (MQ=255) cATCGGCGCAGCTTTGGGCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAg > 1:1320522/1‑70 (MQ=255) tCGGCGCAGCTTTGGGCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTaa < 1:1639802/71‑1 (MQ=255) cGGCGCAGCTTTGGGCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTaaa > 1:1863568/1‑71 (MQ=255) gTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTc > 1:3599372/1‑71 (MQ=255) taatggagaaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAg > 1:2996014‑M1/32‑60 (MQ=255) taatggagaaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAg > 1:2991798‑M1/32‑60 (MQ=255) gcgcACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAACCa > 1:600451/1‑71 (MQ=255) aatggagaaaataaaattaaaatgttataaGTCGAGATTAAg < 1:1852743‑M1/12‑1 (MQ=255) aatggagaaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAAt < 1:389357‑M1/23‑1 (MQ=255) aatggagaaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGaa < 1:1842823‑M1/28‑1 (MQ=255) aatggagaaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGATg > 1:271526‑M1/31‑62 (MQ=255) atggagaaaataaaattaaaatgttataaGTCGAGATTAAGTa > 1:2579794‑M1/30‑43 (MQ=255) atggagaaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGa > 1:926169‑M1/30‑50 (MQ=255) atggagaaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCt < 1:367519‑M1/25‑1 (MQ=255) atggagaaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGAtga < 1:1647173‑M1/33‑2 (MQ=255) tggagaaaataaaattaaaatgttataaGTCGAGATTa > 1:114148‑M1/29‑38 (MQ=255) tggagaaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGa > 1:2748568‑M1/29‑49 (MQ=255) tggagaaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGa > 1:324308‑M1/29‑49 (MQ=255) tggagaaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGaa > 1:1140045‑M1/29‑56 (MQ=255) ggagaaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCt > 1:206953‑M1/28‑52 (MQ=255) ggagaaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGa < 1:3443489‑M1/30‑1 (MQ=255) gagaaaataaaattaaaatgttataaGTCGAGAtt > 1:119168‑M1/27‑35 (MQ=255) gagaaaataaaattaaaatgttataaGTCGAGAtt > 1:732734‑M1/27‑35 (MQ=255) gagaaaataaaattaaaatgttataaGTCGAGATTaa < 1:323577‑M1/11‑1 (MQ=255) gagaaaataaaattaaaatgttataaGTCGAGATTAAGTaaa < 1:890386‑M1/16‑1 (MQ=255) gagaaaataaaattaaaatgttataaGTCGAGATTAAGTAAAc > 1:2209517‑M1/27‑43 (MQ=255) gagaaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATc < 1:2306118‑M1/24‑1 (MQ=255) gagaaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGAt > 1:945329‑M1/27‑57 (MQ=255) cTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAACCACGttt > 1:751160/1‑71 (MQ=255) agaaaataaaattaaaatgttataaGTCGAGATTAAGTa > 1:352097‑M1/26‑39 (MQ=255) agaaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGaa < 1:2097270‑M1/22‑1 (MQ=255) agaaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGAt > 1:835468‑M1/26‑56 (MQ=255) gggACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAACCACGTTTCg > 1:2723647/1‑71 (MQ=255) gggACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAACCACGTTTCg > 1:1742731/1‑71 (MQ=255) aaaataaaattaaaatgttataaGTCTAGATTAAGTAAACCGGAATc > 1:1262816‑M1/24‑47 (MQ=255) aaaataaaattaaaatgttataaGTCGAGATTAAGTaa > 1:2779652‑M1/24‑38 (MQ=255) aaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGa > 1:1185511‑M1/24‑44 (MQ=255) aaataaaattaaaatgttataaGTCGAGATTAAGTAAAc < 1:1623782‑M1/17‑1 (MQ=255) gACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAACCACGTTTCGTa < 1:1074927/71‑1 (MQ=255) aataaaattaaaatgttataaGTCGAGATTAAGTaaa > 1:1463567‑M1/22‑37 (MQ=255) aataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGaa > 1:3297672‑M1/22‑49 (MQ=255) aataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGaa > 1:5882‑M1/22‑49 (MQ=255) aataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAg > 1:62758‑M1/22‑50 (MQ=255) aataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGa < 1:910449‑M1/30‑1 (MQ=255) aataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGATg > 1:365533‑M1/22‑53 (MQ=255) ataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAAt < 1:684089‑M1/23‑1 (MQ=255) ataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGaa > 1:2234725‑M1/21‑48 (MQ=255) aCTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAACCACGTTTCg < 1:3184804/68‑1 (MQ=255) taaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTg > 1:2660579‑M1/20‑45 (MQ=255) taaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGaa < 1:915009‑M1/28‑1 (MQ=255) taaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGaa > 1:312023‑M1/20‑47 (MQ=255) taaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGaa > 1:3573182‑M1/20‑47 (MQ=255) taaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGATg > 1:2651728‑M1/20‑51 (MQ=255) ttGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGa < 1:2919761/39‑1 (MQ=255) ttGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGa < 1:3698148/39‑1 (MQ=255) aaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGatgac > 1:1592594‑M1/19‑50 (MQ=255) aaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGa < 1:937983‑M1/30‑1 (MQ=255) aaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGa < 1:1403468‑M1/30‑1 (MQ=255) aaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGa < 1:744537‑M1/30‑1 (MQ=255) aaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGAt < 1:2504524‑M1/31‑1 (MQ=255) aaattaaaatgttataaGTCGAGATTAAGTAAAcc < 1:2204804‑M1/18‑1 (MQ=255) aaattaaaatgttataaGTCGAGATTAAGTAAACCGGa > 1:1828068‑M1/18‑38 (MQ=255) aaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGATg < 1:2459557‑M1/32‑1 (MQ=255) aattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGAt < 1:2562042‑M1/31‑1 (MQ=255) attaaaatgttataaGTCGAGATTAAGTAAACCGGAATCt > 1:2117187‑M1/16‑40 (MQ=255) attaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGa > 1:1321627‑M1/16‑42 (MQ=255) attaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGAt < 1:369721‑M1/31‑1 (MQ=255) ttaaaatgttataaGTCGAGATTAAGTAAACCGGAAt < 1:3344950‑M1/23‑1 (MQ=255) ttaaaatgttataaGTCGAGATTAAGTAAACCGGAAt > 1:621887‑M1/15‑37 (MQ=255) ttaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGaa > 1:2578474‑M1/15‑42 (MQ=255) ttaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGaa > 1:535733‑M1/15‑42 (MQ=255) ttaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGATg > 1:1911997‑M1/15‑46 (MQ=255) gTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGAt < 1:3051887/45‑1 (MQ=255) taaaatgttataaGTCGAGATTAAGTAAACCGGAAt < 1:1778285‑M1/23‑1 (MQ=255) taaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAg < 1:2970381‑M1/29‑1 (MQ=255) taaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAg < 1:1956089‑M1/29‑1 (MQ=255) tCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAACCACGttt < 1:792802/59‑1 (MQ=255) aaaatgttataaGTCGAGATTAAGTAAACCGGAAt < 1:2305094‑M1/23‑1 (MQ=255) aaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGaa < 1:3430438‑M1/28‑1 (MQ=255) aaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGAtga < 1:357487‑M1/33‑2 (MQ=255) cTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAACCACGttt < 1:3554509/57‑1 (MQ=255) cTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAACCACGTTTCGTACACCTGCggg > 1:1385742/1‑71 (MQ=255) tGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTg < 1:121485/46‑1 (MQ=255) gATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGa > 1:1522129/1‑39 (MQ=255) tgttataaGTCGAGATTAAGTAAACCGGAATCTGaa < 1:2282628‑M1/28‑1 (MQ=255) aTTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGa > 1:403188/1‑38 (MQ=255) aTTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGt > 1:3220767/1‑41 (MQ=255) aTTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAACCACGTTTCGTACACCTGCGGGTGc < 1:3605924/71‑1 (MQ=255) ttataaGTCGAGATTAAGTAAACCGGAATCTGAAg > 1:312574‑M1/7‑35 (MQ=255) ttataaGTCGAGATTAAGTAAACCGGAATCTGAAGa < 1:3472932‑M1/30‑1 (MQ=255) ttataaGTCGAGATTAAGTAAACCGGAATCTGAAGAtga < 1:630862‑M1/33‑2 (MQ=255) ttataaGTCGAGATTAAGTAAACCGGAATCTGAAGAt > 1:111088‑M1/7‑37 (MQ=255) tgtgTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAACCACGTTTCGTa > 1:49159/1‑53 (MQ=255) | GACCGAACACCATCGGCGCAGCTTTGGGCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAACCACGTTTCGTACACCTGCGGGTGC > W3110S.gb/205029‑205159 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |