| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 2855747 | 45 (1.210) | 8 (0.220) | 6/98 | NT | 15.4% | intergenic (‑285/‑2) | ygbA/mutS | hypothetical protein/methyl‑directed mismatch repair protein |
| ? | W3110S.gb | 4124505 = | 44 (1.210) | coding (1/837 nt) | dam | DNA adenine methylase | |||||
TTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCC > W3110S.gb/2855681‑2855814 | ttATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAAcccc > 1:3694439/1‑68 (MQ=255)ttATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACAGGACATAACCC > 1:3698551‑M1/1‑67 (MQ=255) tgcagaagaaaggcggaagttgcctctggcgagcataaTTTAATATCAGTAAACCGGACATAaccca > 1:2977166‑M2/39‑66 (MQ=255) tgcagaagaaaggcggaagttgcctctggcgagcataaTTTAATATCAGTAAACCGGACATAaccca > 1:1287086‑M2/39‑66 (MQ=255) gtgATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATg < 1:698119/67‑1 (MQ=255) aCAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATg > 1:1087535/1‑61 (MQ=255) cAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAAt > 1:3244395/1‑68 (MQ=255) aaCGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATa > 1:2039303/1‑68 (MQ=255) tAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTc < 1:104425/69‑1 (MQ=255) tAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTc < 1:896511/69‑1 (MQ=255) tAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTc < 1:201149/69‑1 (MQ=255) aaaaCCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCg > 1:2480458/1‑68 (MQ=255) ccATCACACCCCATTTAATATCCGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGacgcc < 1:1247392/69‑1 (MQ=255) ccATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGacgcc < 1:1566273/69‑1 (MQ=255) aTCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGacgccca < 1:2033477/69‑1 (MQ=255) acacCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCTATAGAAAATTTCGacgcccatac > 1:405432/1‑69 (MQ=255) ccccATTTAATATCAGGGAACCGGACATAACCCCATGAGTGc > 1:1415752/1‑42 (MQ=255) ccccATTTAATATCAGGGAACCGGACATAACCCCATGAGTGc < 1:3657685/42‑1 (MQ=255) taattTAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggg > 1:430618‑M1/3‑31 (MQ=255) taattTAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggg > 1:3471435‑M1/3‑31 (MQ=255) cATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGacgcccatacgcccat < 1:714819/69‑1 (MQ=255) aTTTAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggca < 1:2134477‑M1/69‑41 (MQ=255) aTTTAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtggg < 1:808827‑M1/60‑32 (MQ=255) tttAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGacgccca < 1:1812554/58‑1 (MQ=255) tttAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCatga < 1:1546564/69‑1 (MQ=255) tAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttt < 1:968154‑M1/46‑21 (MQ=255) tAATATCAGGGTACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCatg > 1:3655943/1‑66 (MQ=255) tAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGaa < 1:863232/42‑1 (MQ=255) tAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGacgcccatacgcccat > 1:1112779/1‑65 (MQ=255) tAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGacgccca > 1:781559/1‑56 (MQ=255) tAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGa > 1:335435/1‑50 (MQ=255) tAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCatga > 1:632388/1‑67 (MQ=255) tAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCatga > 1:1887159/1‑67 (MQ=255) tAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCatga > 1:3428636/1‑67 (MQ=255) atatCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagta < 1:1162505‑M1/68‑45 (MQ=255) atCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGacgcccatacgcccat < 1:710420/61‑1 (MQ=255) tCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGacgccca > 1:2818938/1‑51 (MQ=255) cAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAAt > 1:2053528/1‑39 (MQ=255) cAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTc > 1:3686725/1‑42 (MQ=255) cAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTc > 1:565382/1‑42 (MQ=255) cAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTc > 1:3554414/1‑42 (MQ=255) cAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTc > 1:2217035/1‑42 (MQ=255) cAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATgc > 1:3068451/1‑64 (MQ=255) cAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATgc > 1:240222/1‑64 (MQ=255) aGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGt < 1:2126622/69‑1 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGacgc < 1:3404432/43‑1 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGacgc < 1:3125590/43‑1 (MQ=255) aaCCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAt > 1:2081310/1‑67 (MQ=255) aaCCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAt > 1:1871518/1‑67 (MQ=255) ccGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgcttg < 1:890949‑M1/68‑56 (MQ=255) ggACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgcttgatg < 1:438177‑M1/69‑59 (MQ=255) ggACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAgg > 1:241547/1‑69 (MQ=255) gACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAgg > 1:559092/1‑68 (MQ=255) cATAACCCCATGAGTGCAATAGAAAATTTCGacgcccatacgcccat > 1:1822642/1‑47 (MQ=255) cATAACCCCATGAGTGCAATAGAAAATTTCGacgcccatacgcccat > 1:175818/1‑47 (MQ=255) cATAACCCCATGAGTGCAATAGAAAATTTCGacgcccatacgcccat > 1:25088/1‑47 (MQ=255) cATAACCCCATGAGTGCAATAGAAAATTTCGacgcccatacgcccat > 1:3406555/1‑47 (MQ=255) cATAACCCCATGAGTGCAATAGAAAATTTCGacgcccatacgcccat > 1:354379/1‑47 (MQ=255) cATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGt > 1:1149922/1‑58 (MQ=255) aaCCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgcttgatgatatta < 1:3185449‑M1/69‑65 (MQ=255) aCCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgcttgatgatattaa > 1:362282‑M1/1‑4 (MQ=255) aCCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct < 1:2992184/58‑1 (MQ=255) cccATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGcc < 1:704019/69‑1 (MQ=255) cccATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGc < 1:2064413/68‑1 (MQ=255) cccATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGc < 1:2263416/68‑1 (MQ=255) cccATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGc < 1:2267657/68‑1 (MQ=255) catgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgcttgatgatattaaac > 1:598429‑M1/1‑1 (MQ=255) catgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgcttgatgatattaaac > 1:951531‑M1/1‑1 (MQ=255) | TTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCC > W3110S.gb/2855681‑2855814 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |