| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 3071050 = | 38 (1.020) | 28 (0.950) +AAATGCTCTC |
3/80 | NT | 48.7% | coding (229/1164 nt) | pgk | phosphoglycerate kinase |
| ? | W3110S.gb | 4347351 = | 36 (0.970) | coding (761/1356 nt) | melA | alpha‑galactosidase, NAD(P)‑binding | |||||
GCACCGAAGCCGAATATTCATGGCAATACTCGCTGCCAGAATATTGTGCGCTACGAAATGTTCAAAAAGCTGGGCTATTTCGTCACGGAATCGTCAGAACATTTTGCTGAGTACACACCGTGGTT > W3110S.gb/4347293‑4347417 | gcaCCGAAGCCGAATATTCATGGCAATACTCGCTGCCAGAATATTGTGCGCTACGAAATGTTCAAAAAg > 1:2614128/1‑69 (MQ=255) aCCGAAGCCGAATATTCATGGCAATACTCGCTGCCAGAATATTGTGCGCTACGAAATGTTCaa < 1:1043221/63‑1 (MQ=255) aCCGAAGCCGAATATTCATGGCAATACTCGCTGCCAGAATATTGTGCGCTACGAAATGTTCaa < 1:3166524/63‑1 (MQ=255) aCCGAAGCCGAATATTCATGGCAATACTCGCTGCCAGAATATTGTGCGCTACGAAATGTTCAAAAAGCt > 1:3189509/1‑69 (MQ=255) aCCGAAGCCGAATATTCATGGCAATACTCGCTGCCAGAATATTGTGCGCTACGAAATGTTCAAAAAGCt > 1:2691812/1‑69 (MQ=255) cGAAGCCGAATATTCATGGCAATACTCGCTGCCAGAATATTGTGCGCTAGGAAATGTTCAAAAAGCTgg > 1:1968140/1‑69 (MQ=255) cGAAGCCGAATATTCATGGCAATACTCGCTGCCAGAATATTGTGCGCTACGAAATGTTCAAAAAGCTgg > 1:237863/1‑69 (MQ=255) cGAAGCCGAATATTCATGGCAATACTCGCTGCCAGAATATTGTGCGCTACGAAATGTTCAAAAAGCTgg > 1:1169353/1‑69 (MQ=255) tatTCATGGCAATACTCGCTGCCAGAATATTGTGCGCTACGAAATGTTCAAAAAGCTGGGCTATTTCGt > 1:849949/1‑69 (MQ=255) atTCATGGCAATACTCGCTGCCAGAATATTGTGCGCTACGAAATGTTCAAAAAGCTGGGCTATTTCGTc < 1:645573/69‑1 (MQ=255) ttCATGGCAATACTCGCTGCCAGAATATTGTGCGCTACGAAATGTTCAAAAAGCTGGGCTATTTCGTCa > 1:2968944/1‑69 (MQ=255) ttCATGGCAATACTCGCTGCCAGAATATTGTGCGCTACGAAATGTTCAAAAAGCTGGGCTATTTCGTCa > 1:1902168/1‑69 (MQ=255) cATGGCAATACTCGCTGCCAGAATATTGTGCGCTACGAAATGTTCAAAAAGCTGGGCTATTTCGTc > 1:996948/1‑66 (MQ=255) cATGGCAATACTCGCTGCCAGAATATTGTGCGCTACGAAATGTTCAAAAAGCTGGGCTATTTCGTCAc > 1:1001200/1‑68 (MQ=255) cTCGCTGCCAGAATATTGTGCGCTACGAAATGTTCaaaaa < 1:2146372/40‑1 (MQ=255) cTCGCTGCCAGAATATTGTGCGCTACGAAATGTTCaaaaa < 1:2219554/40‑1 (MQ=255) cTCGCTGCCAGAATATTGTGCGCTACGAAATGTTCAAAAAGCTGGGCTATTTCGTCACgg < 1:3341791/60‑1 (MQ=255) cTCGCTGCCAGAATATTGTGCGCTACGAAATGTTCAAAAAGCTGGGCTATTTCGTCACGGAATCGTCAg > 1:1888090/1‑69 (MQ=255) cTCGCTGCCAGAATATTGTGCGCTACGAAATGTTCAAAAAGCTGGGCTATTTCGTCACGGAATCGTCAg > 1:577218/1‑69 (MQ=255) cTCGCTGCCAGAATATTGTGCGCTACGAAATGTTCAAAAAGCTGGGCTATTTCGTCACGGAATCGTCAg > 1:1297581/1‑69 (MQ=255) cTCGCTGCCAGAATATTGTGCGCTACGAAATGTTCAAAAAGCTGGGCTATTTCGTCACGGAATCGTCAg > 1:1177186/1‑69 (MQ=255) cTCGCTGCCAGAATATTGTGCGCTACGAAATGTTCAAAAAGCTGGGCTATTTCGTCACGGAATCGTCAg > 1:999909/1‑69 (MQ=255) cTCGCTGCCAGAATATTGTGCGCTACGAAATGTTCAAAAAGCTGGGCTATTTCGTCACGGAATCGTCAg > 1:2326389/1‑69 (MQ=255) tCGCTGCCAGAATATTGTGCGCTACGAAATGTTCAAAAAGCTGGGCt < 1:2650320/47‑1 (MQ=255) gtctctctgctgccggaaatgctctcTGTTCAAAAAg > 1:103064‑M2/27‑37 (MQ=255) gtctctctgctgccggaaatgctctcTGTTCAAAAAg > 1:454315‑M2/27‑37 (MQ=255) gtctctctgctgccggaaatgctctcTGTTCAAAAAg > 1:6209‑M2/27‑37 (MQ=255) gtctctctgctgccggaaatgctctcTGTTCAAAAAg > 1:661070‑M2/27‑37 (MQ=255) gtctctctgctgccggaaatgctctcTGTTCAAAAAg > 1:1099782‑M2/27‑37 (MQ=255) gtctctctgctgccggaaatgctctcTGTTCAAAAAg > 1:1175938‑M2/27‑37 (MQ=255) gtctctctgctgccggaaatgctctcTGTTCAAAAAg > 1:1414373‑M2/27‑37 (MQ=255) gtctctctgctgccggaaatgctctcTGTTCAAAAAg > 1:1742393‑M2/27‑37 (MQ=255) tGCCAGAATATTGTGCGCTACGAAATGTTCAAAAAGCTGGGCTATTTCGTCACGGAATCGTCAg < 1:1770500/64‑1 (MQ=255) ctctctgctgccggaaatgctctcTGTTCAAAAAg > 1:921361‑M2/25‑35 (MQ=255) ctctctgctgccggaaatgctctcTGTTCAAAAAg > 1:1985980‑M2/25‑35 (MQ=255) ctctctgctgccggaaatgctctcTGTTCAAAAAg > 1:3149765‑M2/25‑35 (MQ=255) ctctctgctgccggaaatgctctcTGTTCAAAAAGc > 1:1901507‑M2/25‑36 (MQ=255) ctctctgctgccggaaatgctctcTGTTCAAAAAGc > 1:1634834‑M2/25‑36 (MQ=255) ctctctgctgccggaaatgctctcTGTTCAAAAAGc > 1:2439304‑M2/25‑36 (MQ=255) ctctctgctgccggaaatgctctcTGTTCAAAAAGc > 1:2607202‑M2/25‑36 (MQ=255) ctctctgctgccggaaatgctctcTGTTCAAAAAGCt < 1:2119017‑M2/13‑1 (MQ=255) ctctctgctgccggaaatgctctcTGTTCAAAAAGCt < 1:3612685‑M2/13‑1 (MQ=255) ctctctgctgccggaaatgctctcTGTTCAAAAAGCt < 1:3426951‑M2/13‑1 (MQ=255) ctctctgctgccggaaatgctctcTGTTCAAAAAGCt < 1:1816510‑M2/13‑1 (MQ=255) ctctatgctgccggaaatgctctcTGTTCAAAAAg > 1:558581‑M2/25‑35 (MQ=255) tctctgctgccggaaatgctctcTGTTCAAAAAGc > 1:2877201‑M2/24‑35 (MQ=255) tctctgctgccggaaatgctctcTGTTCAAAAAGc > 1:1641751‑M2/24‑35 (MQ=255) tctctgctgccggaaatgctctcTGTTCAAAAAGc > 1:841159‑M2/24‑35 (MQ=255) tctctgctgccggaaatgctctcTGTTCAAAAAGc > 1:2209517‑M2/24‑35 (MQ=255) tctctgctgccggaaatgctctcTGTTCAAAAAGc > 1:2996287‑M2/24‑35 (MQ=255) tctctgctgccggaaatgctctcTGTTCAAAAAGCt > 1:1313157‑M2/24‑36 (MQ=255) ctctgctgccggaaatgctctcTGTTCAAAAAGCt < 1:2273986‑M2/13‑1 (MQ=255) ctctgctgccggaaatgctctcTGTTCAAAAAGCt < 1:2150345‑M2/13‑1 (MQ=255) cAGAATATTGTGCGCTACGAAATGTTCAAAAAGCTGGGCTATTTCGTCACGGAATCGTCAGAACAtttt > 1:3015251/1‑69 (MQ=255) cAGAATATTGTGCGCTACGAAATGTTCAAAAAGCTGGGCTATTTCGTCACGGAATCGTCAGAACAtttt > 1:2515754/1‑69 (MQ=255) aGAATATTGTGCGCTACGAAATGTTCAAAAAGCTTGGCTATTTCGTCACGGAATCGTCAGAACAtttt < 1:2643733/68‑1 (MQ=255) aGAATATTGTGCGCTAAGAAATGTTCAAAAAGCTGGGCTATTTCGTCACGGAATCGTCAGAACATTTTg < 1:879215/69‑1 (MQ=255) atatTGTGCGCTACGAAATGTTCAAAAAGCTGGGCTATTTCGTCACTGaa < 1:27820/50‑1 (MQ=255) atatTGTGCGCTACGAAATGTTCAAAAAGCTGGGCTATTTCGTCACGGaa < 1:3622565/50‑1 (MQ=255) atatTGTGCGCTACGAAATGTTCAAAAAGCTGGGCTATTTCGTCACGGAATCGTCAGAACATTTTGCTg > 1:2599747/1‑69 (MQ=255) tatTGTGCGCTACGAAATGTTCAAAAAGCTGGGCTATTTCGt < 1:2788162/42‑1 (MQ=255) tatTGTGCGCTACGAAATGTTCAAAAAGCTGGGCTATTTCGTCACGGAATCGTCAGAACAtttt > 1:249086/1‑64 (MQ=255) ttGTGCGCTACGAAATGTTCAAAAAGCTGGGCTATTTCGTCACGGAATCGt < 1:2263276/51‑1 (MQ=255) ttGTGCGCTACGAAATGTTCAAAAAGCTGGGCTATTTCGTCACGGAATCGTCAGAACATTTTGCTGAg > 1:61045/1‑68 (MQ=255) aaaTGTTCAAAAAGCTGGGCTATTTCGTCACGGAATCGTCAGAACATTTTGCTGAGTa > 1:2866795/1‑58 (MQ=255) aaTGTTCAAAAAGCTGGGCTATTTCGTCACGGAATCGTCAGAACATTTTGCTGAGTACACACCGTGGtt < 1:3577431/69‑1 (MQ=255) | GCACCGAAGCCGAATATTCATGGCAATACTCGCTGCCAGAATATTGTGCGCTACGAAATGTTCAAAAAGCTGGGCTATTTCGTCACGGAATCGTCAGAACATTTTGCTGAGTACACACCGTGGTT > W3110S.gb/4347293‑4347417 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |