Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4547669	4547677	9	25 [0]	[0] 31	fimE/fimA	tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin

ACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAAC  >  W3110S.gb/4547599‑4547736                                                                      |                                                                     aCAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAAt                                                                     >  1:1034384‑M2/1‑70 (MQ=255)    aTAGAATATTAAGCCAACAAATAAACTCAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAAtggc                                                                  >  1:1836645‑M2/1‑67 (MQ=255)     tAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAAtggcc                                                                 <  1:805261‑M2/71‑6 (MQ=255)             tAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCaaaa                                                                      >  1:2253358/1‑58 (MQ=255)              aaGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAAtggccccaattgtc                                                        <  1:237299‑M2/71‑15 (MQ=255)                    acaaATAAACTGAAAAAGTTTGTCCGCGATGCTATCCTCTATGAGTCAAAAtggcccc                                                               >  1:599852‑M2/1‑51 (MQ=255)                     caaATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCaaaa                                                                      >  1:1383452/1‑50 (MQ=255)                      aaaTAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAAtggccccaattgtcttgtatt                                                 <  1:141302‑M2/70‑22 (MQ=255)                        aTAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAAtggccccaattgtcttgtatttat                                              <  1:1296185‑M2/71‑25 (MQ=255)                        aTAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAAtggccccaattgtcttgtatttat                                              <  1:495245‑M2/71‑25 (MQ=255)                        aTAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAAtggcccca                                                              >  1:2297210‑M2/1‑47 (MQ=255)                                     gTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAAtggccccaattgtcttgtatttatttgtttttttaac                                 <  1:690194‑M2/71‑38 (MQ=255)                                         gTCCGCGATGCTTTCCTCTATGAGTCAAAAtggccccaattttcttgtatttatttgtttttttaacttt                              >  1:635867‑M2/1‑30 (MQ=255)                                                  gCTTTCCTCTATGAGTCAAAAtggccccaattgtcttgtatttatttgtttttttaactttattatcaat                     <  1:2697155‑M2/70‑50 (MQ=255)                                                  gCTTTCCTCTATGAGTCAAAAtggccccaattgtcttgtatttatttgtttttttaactttattatcaat                     <  1:1637516‑M2/70‑50 (MQ=255)                                                   cTTTCCTCTATGAGTCAAAAtggccccaattgtcttgtatttatttgtttttttaactttattatcaat                     <  1:621629‑M2/69‑50 (MQ=255)                                                        ctctATGAGTCAAAAtggccccaattgtcttgtatttatttgtttttttaactttattatcaataagtta               <  1:2082814‑M2/70‑56 (MQ=255)                                                         tctATGAGTCAAAAtggccccaattgtcttgtatttatttgttttt                                      >  1:1615482‑M2/1‑14 (MQ=255)                                                           tATGAGTCAAAAtggccccaattgtcttgtatttatttgtt                                         <  1:2436331‑M2/41‑30 (MQ=255)                                                           tATGAGTCAAAAtggccccaattgtcttgtatttatttgtt                                         <  1:1397539‑M2/41‑30 (MQ=255)                                                             tGAGTCAAAAtggccccaattgtcttgtatttatttgtttttttaactttattatcaataagttaaatcaa         >  1:849649‑M2/1‑10 (MQ=255)                                                             tGAGTCAAAAtggccccaattgtcttgtatttatttg                                           >  1:2058860‑M2/1‑10 (MQ=255)                                                                   aaaatggccccaattgtcttgtatttatttgttttttttaactttattatcaataagttaaatcaaac      <  1:2143653‑M2/68‑65 (MQ=255)                                                                   aaaatggccccaattgtcttgtatttatttgttttttttaactttattatcaataagttaaatcaaac      <  1:641833‑M2/68‑65 (MQ=255)                                                                    aaatggccccaattgtcttgtatttatttgtttttttaactttattatcaataagttaaatcaaacctctt  >  1:2655386‑M2/1‑3 (MQ=255)                                                                      |                                                                     ACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAAC  >  W3110S.gb/4547599‑4547736

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑