| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 2412225 | NA (NA) | 97 (1.520) | 31/128 | 0.2 | 82.9% | intergenic (‑55/‑782) | insA/yfbQ | IS1 element protein/predicted aminotransferase |
| ? | W3110S.gb | = 3748807 | 20 (0.310) | coding (176/984 nt) | tnaB | tryptophan transporter of low affinity | |||||
GAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCA > W3110S.gb/2412157‑2412295 | gAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCa > 1:565544/1‑70 (MQ=31)gAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCa > 1:3383089/1‑70 (MQ=31) aaCAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCaaa > 1:3924753/1‑70 (MQ=35) aaCAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCaaa > 1:2607493/1‑70 (MQ=35) aCAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCaaaaa < 1:3338804/71‑1 (MQ=38) aCAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCaaaa > 1:1710491/1‑70 (MQ=37) cAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCaaaa > 1:2423629/1‑69 (MQ=37) cAGAAGCCACTGGAGCACCTCAAAAACACAATCATACACTAAATCAGTAAGTTGGCAGCATCACCaaaa > 1:2492012/1‑69 (MQ=255) gAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGc < 1:1906786/71‑1 (MQ=255) gAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGc > 1:476780/1‑71 (MQ=255) gCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGAc < 1:2898268/71‑1 (MQ=255) gCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGAc > 1:3046287/1‑71 (MQ=255) aCTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTca < 1:2533872/71‑1 (MQ=255) aCTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTca < 1:24817/71‑1 (MQ=255) cTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCg < 1:1867583/65‑1 (MQ=255) cTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCg < 1:4123562/65‑1 (MQ=255) cTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCg < 1:3082501/65‑1 (MQ=255) ggAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACAt > 1:4333620/1‑71 (MQ=255) ggAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACAt > 1:940730/1‑71 (MQ=255) gCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGt > 1:1317168/1‑71 (MQ=255) ccTCAAAAACACCATCATACACTAAATCAGTAAGTTGTCAGCATCACCAAAAAAGCGACTCACATTGTTcc > 1:2750961/1‑71 (MQ=255) ccTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCaaaa < 1:1131945/52‑1 (MQ=38) cTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCATCATCACCAAAAAAGCGACt < 1:2836411/59‑1 (MQ=255) tCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTcac > 1:623157/1‑61 (MQ=255) tCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACAtt > 1:833096/1‑64 (MQ=255) tCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACAtt > 1:2272676/1‑64 (MQ=255) tCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACAtt > 1:2702360/1‑64 (MQ=255) aaaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTta < 1:4618455/71‑1 (MQ=255) aaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTtat < 1:3891268/71‑1 (MQ=255) aaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTtat < 1:2008996/71‑1 (MQ=255) aaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTtat < 1:2397769/71‑1 (MQ=255) aaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTtat < 1:4594757/71‑1 (MQ=255) aaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTtat < 1:1891409/71‑1 (MQ=255) aaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTtat < 1:1693766/71‑1 (MQ=255) aaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTtat < 1:3301863/71‑1 (MQ=255) aaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTtat < 1:1067238/71‑1 (MQ=255) aaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTtat < 1:1149065/71‑1 (MQ=255) aaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGc < 1:3494435/50‑1 (MQ=255) cacCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATg < 1:3567106/71‑1 (MQ=255) acCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGc < 1:2350513/46‑1 (MQ=255) ccATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTtat < 1:3264142/65‑1 (MQ=255) ccATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTtat < 1:3298715/65‑1 (MQ=255) catcatACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTtat < 1:3799990/64‑1 (MQ=255) catcatACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTtat < 1:3269092/64‑1 (MQ=255) tcatACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTtat < 1:1900124/62‑1 (MQ=255) tcatACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTtat < 1:1779608/62‑1 (MQ=255) catACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTtat < 1:4579826/61‑1 (MQ=255) atACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAg > 1:3431759/1‑71 (MQ=255) atACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAg > 1:168822/1‑71 (MQ=255) atACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAg > 1:1510886/1‑71 (MQ=255) tACACTAAATCAGTAAGTTGGCAGCATCACCAAAAACGCGACTCACATTGTTCCGt < 1:975517/56‑1 (MQ=255) tACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTcaca < 1:3292581/47‑1 (MQ=255) tACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTtata < 1:3249854/60‑1 (MQ=255) tACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTtata < 1:1383213/60‑1 (MQ=255) tACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTtata < 1:2823108/60‑1 (MQ=255) tACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTtat < 1:612011/59‑1 (MQ=255) cacTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATaa > 1:3592558/1‑59 (MQ=255) cacTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAg > 1:1953269/1‑68 (MQ=255) cTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACt < 1:1834303/39‑1 (MQ=255) tCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAg < 1:2460173/71‑1 (MQ=255) aGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGaa < 1:3257961/71‑1 (MQ=255) aGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGaa < 1:123488/71‑1 (MQ=255) gTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGaa < 1:3122209/70‑1 (MQ=255) tAAGTTGGCAGCATCACCAAAAAAGCGACTCACAt < 1:454955/35‑1 (MQ=255) tAAGTTGGCAGCATCACCAAAAAAGCGACTCACAt > 1:2368913/1‑35 (MQ=255) gTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTtat < 1:2177760/43‑1 (MQ=255) ggCAGCATCACCAAAAAAGCGACTCACATT‑TTCCGTtat < 1:4650848/39‑1 (MQ=38) aagcaTCACCAAAAAAGCGACTCACATTGTTCCGTtat < 1:2761000/37‑1 (MQ=255) agcaTCACCAAAAAAGCGACTCACATTGTTCCGTtat < 1:3403926/37‑1 (MQ=255) agcaTCACCAAAAAAGCGACTCACATTGTTCCGTtat < 1:4188124/37‑1 (MQ=255) gcaTCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAatata < 1:3602603/63‑1 (MQ=255) caTCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAggg < 1:2902962/71‑1 (MQ=255) aTCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAggg < 1:3872421/70‑1 (MQ=255) aTCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAggg < 1:2682939/70‑1 (MQ=255) tCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAatat < 1:2292123/59‑1 (MQ=255) aCCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCg > 1:2261647/1‑71 (MQ=255) aCCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCg > 1:2541413/1‑71 (MQ=255) aCCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCg > 1:1848308/1‑71 (MQ=255) aCCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCg > 1:3411970/1‑71 (MQ=255) aCCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCg > 1:1578762/1‑71 (MQ=255) aCCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCg > 1:698668/1‑71 (MQ=255) aCCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCg > 1:4047828/1‑71 (MQ=255) aCCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCg < 1:3951762/71‑1 (MQ=255) cAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCa < 1:1283229/71‑1 (MQ=255) | GAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCA > W3110S.gb/2412157‑2412295 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |