Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1131091	1131118	28	14 [1]	[0] 9	flgN	export chaperone for FlgK and FlgL

GTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAG  >  W3110S.gb/1131119‑1131183 |                                                                 gTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAg  <  1:1104358/65‑1 (MQ=255) gTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAg  <  1:1226874/65‑1 (MQ=255) gTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAg  <  1:1892125/65‑1 (MQ=255) gTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAg  <  1:2196203/65‑1 (MQ=255) gTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAg  <  1:2542822/65‑1 (MQ=255) gTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAg  <  1:306712/65‑1 (MQ=255) gTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAg  <  1:911277/65‑1 (MQ=255) gTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAg  <  1:934236/65‑1 (MQ=255) gTAACCAGCCGTTATGTTGATTCACTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAg  <  1:2150038/65‑1 (MQ=255) |                                                                 GTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAG  >  W3110S.gb/1131119‑1131183

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑