Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2810502	2810633	132	40 [0]	[0] 66	emrA	multidrug efflux system

TGATTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGCACA  >  W3110S.gb/2810438‑2810501                                                                | tgatTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:1374456/64‑1 (MQ=255)  gatTAACGGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:83589/63‑1 (MQ=255)  gatTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:371228/63‑1 (MQ=255)  gatTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:1182936/63‑1 (MQ=255)  gatTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:1862879/63‑1 (MQ=255)  gatTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:1885514/63‑1 (MQ=255)  gatTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:206262/63‑1 (MQ=255)  gatTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:20839/63‑1 (MQ=255)  gatTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:211476/63‑1 (MQ=255)  gatTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:277055/63‑1 (MQ=255)  gatTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:326755/63‑1 (MQ=255)  gatTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:367174/63‑1 (MQ=255)  gatTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:1767059/63‑1 (MQ=255)  gatTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:488719/63‑1 (MQ=255)  gatTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:573247/63‑1 (MQ=255)  gatTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:674171/63‑1 (MQ=255)  gatTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:730077/63‑1 (MQ=255)  gatTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:8269/63‑1 (MQ=255)  gatTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:869121/63‑1 (MQ=255)  gatTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:918587/63‑1 (MQ=255)  gatTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:1462934/63‑1 (MQ=255)  gatTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:122563/63‑1 (MQ=255)  gatTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:1231206/63‑1 (MQ=255)  gatTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:1259643/63‑1 (MQ=255)  gatTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:1271074/63‑1 (MQ=255)  gatTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:1324365/63‑1 (MQ=255)  gatTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:133320/63‑1 (MQ=255)  gatTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:1350739/63‑1 (MQ=255)  gatTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:142850/63‑1 (MQ=255)  gatTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:1759633/63‑1 (MQ=255)  gatTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:1546029/63‑1 (MQ=255)  gatTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:1580706/63‑1 (MQ=255)  gatTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:162275/63‑1 (MQ=255)  gatTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:1631885/63‑1 (MQ=255)  gatTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:1667346/63‑1 (MQ=255)  gatTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:1690165/63‑1 (MQ=255)  gatTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:1691075/63‑1 (MQ=255)  gatTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:1729932/63‑1 (MQ=255)    ttAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:295109/61‑1 (MQ=255)           caagcaGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGcaca  <  1:737758/54‑1 (MQ=255)                                                                | TGATTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGCACA  >  W3110S.gb/2810438‑2810501

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑