Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3290949	3291143	195	44 [0]	[0] 48	yraJ	predicted outer membrane protein

CCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGC  >  W3110S.gb/3291144‑3291208 |                                                                 ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGTATAAAAAAATGAAAAGAgcgc  <  1:1873855/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:461/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:1818339/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:1831404/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:1838139/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:341973/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:364495/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:370058/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:380084/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:399927/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:401844/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:410208/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:1798892/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:497952/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:503000/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:526788/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:566055/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:585674/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:603469/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:609995/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:678989/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:761884/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:991265/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:999354/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:1543449/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:1110843/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:1143959/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:1158562/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:1161905/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:1204290/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:1223360/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:1263494/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:1299927/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:1361203/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:136381/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:1532053/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:1000892/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:1580771/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:1608776/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:1643315/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:1686122/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:170651/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:1729399/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:1763796/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:1765348/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:1769328/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:177628/65‑1 (MQ=255) ccTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgcgc  <  1:1795794/65‑1 (MQ=255) |                                                                 CCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGC  >  W3110S.gb/3291144‑3291208

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑