Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3786684	3786785	102	47 [0]	[0] 45	emrD/ivbL	multidrug efflux system protein/ilvB operon leader peptide

ATTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGA  >  W3110S.gb/3786786‑3786836 |                                                   aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:679045/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:459874/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:469164/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:483548/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:484777/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:497455/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:562893/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:630770/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:64970/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:657098/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:667648/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:675253/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:429031/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:680316/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:752366/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:800905/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:803770/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:913148/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:969963/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:973397/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:979976/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:982689/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:99103/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:157393/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:1175886/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:119165/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:1209987/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:1231687/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:1257646/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:1266636/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:1370649/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:1455658/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:1472672/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:1570405/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:1022050/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:159611/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:1613537/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:1726567/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:180651/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:186882/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:1871616/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:196627/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:202617/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:330170/51‑1 (MQ=255) aTTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGa  <  1:366233/51‑1 (MQ=255) |                                                   ATTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAGGA  >  W3110S.gb/3786786‑3786836

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑