Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4001372	4001507	136	17 [0]	[0] 34	pitA	phosphate transporter, low‑affinity

CCCTGAGCGTAGGTCATGCCTTTCTTACCGATTTTCTCACCGATAGTCGTTGCCACACGGCGCCA  >  W3110S.gb/4001508‑4001572 |                                                                 cccTGAGCGTAGGTCATGCCTTTCTTACCGATTTTCTCACCGATAGTCGTTGCCACACGGCgcca  >  1:504613/1‑65 (MQ=255) cccTGAGCGTAGGTCATGCCTTTCTTACCGATTTTCTCACCGATAGTCGTTGCCACACGGCgcca  >  1:1011414/1‑65 (MQ=255) cccTGAGCGTAGGTCATGCCTTTCTTACCGATTTTCTCACCGATAGTCGTTGCCACACGGCgcca  >  1:1853293/1‑65 (MQ=255) cccTGAGCGTAGGTCATGCCTTTCTTACCGATTTTCTCACCGATAGTCGTTGCCACACGGCgcca  >  1:288987/1‑65 (MQ=255) cccTGAGCGTAGGTCATGCCTTTCTTACCGATTTTCTCACCGATAGTCGTTGCCACACGGCgcca  >  1:306613/1‑65 (MQ=255) cccTGAGCGTAGGTCATGCCTTTCTTACCGATTTTCTCACCGATAGTCGTTGCCACACGGCgcca  >  1:365582/1‑65 (MQ=255) cccTGAGCGTAGGTCATGCCTTTCTTACCGATTTTCTCACCGATAGTCGTTGCCACACGGCgcca  >  1:366524/1‑65 (MQ=255) cccTGAGCGTAGGTCATGCCTTTCTTACCGATTTTCTCACCGATAGTCGTTGCCACACGGCgcca  >  1:445450/1‑65 (MQ=255) cccTGAGCGTAGGTCATGCCTTTCTTACCGATTTTCTCACCGATAGTCGTTGCCACACGGCgcca  >  1:501463/1‑65 (MQ=255) cccTGAGCGTAGGTCATGCCTTTCTTACCGATTTTCTCACCGATAGTCGTTGCCACACGGCgcca  >  1:169930/1‑65 (MQ=255) cccTGAGCGTAGGTCATGCCTTTCTTACCGATTTTCTCACCGATAGTCGTTGCCACACGGCgcca  >  1:659384/1‑65 (MQ=255) cccTGAGCGTAGGTCATGCCTTTCTTACCGATTTTCTCACCGATAGTCGTTGCCACACGGCgcca  >  1:727422/1‑65 (MQ=255) cccTGAGCGTAGGTCATGCCTTTCTTACCGATTTTCTCACCGATAGTCGTTGCCACACGGCgcca  >  1:758535/1‑65 (MQ=255) cccTGAGCGTAGGTCATGCCTTTCTTACCGATTTTCTCACCGATAGTCGTTGCCACACGGCgcca  >  1:8315/1‑65 (MQ=255) cccTGAGCGTAGGTCATGCCTTTCTTACCGATTTTCTCACCGATAGTCGTTGCCACACGGCgcca  >  1:843818/1‑65 (MQ=255) cccTGAGCGTAGGTCATGCCTTTCTTACCGATTTTCTCACCGATAGTCGTTGCCACACGGCgcca  >  1:873710/1‑65 (MQ=255) cccTGAGCGTAGGTCATGCCTTTCTTACCGATTTTCTCACCGATAGTCGTTGCCACACGGCgcca  >  1:957251/1‑65 (MQ=255) cccTGAGCGTAGGTCATGCCTTTCTTACCGATTTTCTCACCGATAGTCGTTGCCACACGGCgcca  >  1:1410610/1‑65 (MQ=255) cccTGAGCGTAGGTCATGCCTTTCTTACCGATTTTCTCACCGATAGTCGTTGCCACACGGCgcca  >  1:1032427/1‑65 (MQ=255) cccTGAGCGTAGGTCATGCCTTTCTTACCGATTTTCTCACCGATAGTCGTTGCCACACGGCgcca  >  1:1137326/1‑65 (MQ=255) cccTGAGCGTAGGTCATGCCTTTCTTACCGATTTTCTCACCGATAGTCGTTGCCACACGGCgcca  >  1:1163060/1‑65 (MQ=255) cccTGAGCGTAGGTCATGCCTTTCTTACCGATTTTCTCACCGATAGTCGTTGCCACACGGCgcca  >  1:1191109/1‑65 (MQ=255) cccTGAGCGTAGGTCATGCCTTTCTTACCGATTTTCTCACCGATAGTCGTTGCCACACGGCgcca  >  1:1208273/1‑65 (MQ=255) cccTGAGCGTAGGTCATGCCTTTCTTACCGATTTTCTCACCGATAGTCGTTGCCACACGGCgcca  >  1:1221479/1‑65 (MQ=255) cccTGAGCGTAGGTCATGCCTTTCTTACCGATTTTCTCACCGATAGTCGTTGCCACACGGCgcca  >  1:1271682/1‑65 (MQ=255) cccTGAGCGTAGGTCATGCCTTTCTTACCGATTTTCTCACCGATAGTCGTTGCCACACGGCgcca  >  1:1305078/1‑65 (MQ=255) cccTGAGCGTAGGTCATGCCTTTCTTACCGATTTTCTCACCGATAGTCGTTGCCACACGGCgcca  >  1:1682471/1‑65 (MQ=255) cccTGAGCGTAGGTCATGCCTTTCTTACCGATTTTCTCACCGATAGTCGTTGCCACACGGCgcca  >  1:144905/1‑65 (MQ=255) cccTGAGCGTAGGTCATGCCTTTCTTACCGATTTTCTCACCGATAGTCGTTGCCACACGGCgcca  >  1:145621/1‑65 (MQ=255) cccTGAGCGTAGGTCATGCCTTTCTTACCGATTTTCTCACCGATAGTCGTTGCCACACGGCgcca  >  1:1482640/1‑65 (MQ=255) cccTGAGCGTAGGTCATGCCTTTCTTACCGATTTTCTCACCGATAGTCGTTGCCACACGGCgcca  >  1:150368/1‑65 (MQ=255) cccTGAGCGTAGGTCATGCCTTTCTTACCGATTTTCTCACCGATAGTCGTTGCCACACGGCgcca  >  1:1650323/1‑65 (MQ=255) cccTGAGCGTAGGTCATGCCTTTCTTACCGATTTTCTCACCGATAGTCGTTGCCACACGGCgcca  >  1:1661867/1‑65 (MQ=255) cccTGAGCGTAGGTCATGCCTTTCTTACCGATTTTCTCACCGATAGTCGTTGCCACACGGCgcc   >  1:342328/1‑64 (MQ=255) |                                                                 CCCTGAGCGTAGGTCATGCCTTTCTTACCGATTTTCTCACCGATAGTCGTTGCCACACGGCGCCA  >  W3110S.gb/4001508‑4001572

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑