Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4444799	4444852	54	89 [0]	[0] 96	ytfL	predicted inner membrane protein

CACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGTCATCA  >  W3110S.gb/4444853‑4444915 |                                                               caCGTGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:173908/63‑1 (MQ=255) caCGGGCGACAGTCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:564299/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGTCCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1330013/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGTCCATCAGCGTGGtcatca  <  1:60312/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:480280/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:577238/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:567029/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:558289/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:555884/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:541014/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:537331/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:525682/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:51540/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:508003/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:591800/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:473833/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:465477/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:429209/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:417307/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:403626/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:393352/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:237671/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:229680/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:220612/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:213676/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:77910/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:922100/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:919548/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:896719/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:842773/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:840206/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:835252/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:812895/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:809762/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:808532/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:795613/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:790668/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:589960/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:750695/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:737424/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:731265/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:726592/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:701099/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:679325/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:670476/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:653404/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:615504/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:210698/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1208695/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1483813/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1480397/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1443471/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1443419/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1383485/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1368019/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1340707/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1311116/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1310890/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1271374/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1252593/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1485359/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1206334/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1196768/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1176749/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1169205/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1152422/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1133020/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1111917/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1055650/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1048924/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1035797/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1013991/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1773124/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:193646/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:186535/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1854951/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1846415/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1819220/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1793512/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1791755/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1783140/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1773491/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1007997/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1655044/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:164380/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1643391/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1617280/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1616633/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1604613/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1594067/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1575612/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:1573213/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca  <  1:148989/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcagca  <  1:2455/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGgcatca  <  1:415657/63‑1 (MQ=255) caCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGgcatca  <  1:1530252/63‑1 (MQ=255) |                                                               CACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGTCATCA  >  W3110S.gb/4444853‑4444915

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑