Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ W3110S.gb 564868 565032 165 41 [0] [0] 186 intD predicted integrase

Only 100 of 186 total aligned reads displayed.

CATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTC  >  W3110S.gb/565033‑565096
|                                                               
cATCAGGTAAATCCCCTAGCTTTTCTACTCTCCAGAGTTCTGCTTTTCGCTTGTCGTGCAAcac  >  1:1247223/1‑62 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCag                               >  1:1663285/1‑35 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTc                  >  1:753961/1‑48 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTTGCTTGTCGTGCAACTc  >  1:237019/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCg          >  1:447615/1‑56 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCaa     >  1:612479/1‑61 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAAc    >  1:1694673/1‑62 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACt   >  1:1684047/1‑63 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACt   >  1:117346/1‑63 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACt   >  1:1518610/1‑63 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACt   >  1:485384/1‑63 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACt   >  1:1633598/1‑63 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACt   >  1:1530470/1‑63 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACt   >  1:274792/1‑63 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:263696/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:464608/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:436035/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:376544/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:364907/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:323221/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:31396/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:284646/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1873395/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1831074/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1860829/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:220696/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1863373/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1867887/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:207322/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:20225/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:66504/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:957869/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:946098/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:916154/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:91330/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:907914/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:859866/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:826773/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:825316/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:810016/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:768468/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:715817/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:457828/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:663975/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:659766/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:652389/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:596415/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:528970/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:525864/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:504916/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:495719/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:469941/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1766230/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:463218/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:118197/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:139189/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1390579/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:135941/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1355251/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1337247/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1330165/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1301435/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1273082/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1217302/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1195472/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1182918/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1420172/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1149228/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1133181/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:112076/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1110372/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1099920/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1065925/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1047606/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1032724/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1022629/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1017530/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:156854/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:181069/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1798030/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1767589/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1016751/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1754140/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1740594/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1648116/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1619895/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1612166/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1608039/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1813895/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1563459/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1545311/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1544373/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1512783/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1473619/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1454395/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1450712/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1447159/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1438025/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTc  >  1:1430364/1‑64 (MQ=255)
cATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTCGTCGTGCAACTc  >  1:1720689/1‑64 (MQ=255)
|                                                               
CATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTC  >  W3110S.gb/565033‑565096

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑