Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1132766	1132798	33	28 [0]	[0] 64	flgB	flagellar component of cell‑proximal portion of basal‑body rod

TCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTC  >  W3110S.gb/1132799‑1132862 |                                                                tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCa                     >  1:506080/1‑45 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:655950/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:352698/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:389555/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:42422/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:44006/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:45007/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:49933/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:511104/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:543493/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:55061/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:562841/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:565301/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:604767/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:616257/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:627165/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:310527/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:673426/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:694526/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:698742/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:718956/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:718971/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:729925/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:764773/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:76848/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:790828/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:831264/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:858099/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:859106/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:884560/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:957236/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:971585/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:1470952/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:1142009/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:1272102/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:1290660/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:1292783/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:1304190/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:1308184/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:1325785/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:1363281/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:1394694/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:1411844/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:1412012/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:1428103/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:1459342/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:1463225/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:1079630/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:1486991/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:1514559/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:152308/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:1607970/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:1686906/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:1698817/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:1717718/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:1733904/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:1791264/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:1794967/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:1812854/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:1879597/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:191343/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:302466/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACAGTATTc  >  1:1852570/1‑64 (MQ=255) tCAACGCAACACATTCCGGCGAAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTc  >  1:1173557/1‑64 (MQ=255) |                                                                TCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTC  >  W3110S.gb/1132799‑1132862

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑